The 2.0 version of rSNPBase

Variant report

Variant rs1412825
Chromosome Location chr1:74663814-74663815
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:74662800-74665800 Active TSS K562 blood
2 chr1:74663000-74664400 Active TSS Primary T cells from cord blood blood
3 chr1:74663000-74664800 Active TSS HMEC breast
4 chr1:74663200-74664000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:74663200-74664200 Active TSS Primary T helper cells PMA-I stimulated --
6 chr1:74663200-74664200 Active TSS Brain Germinal Matrix brain
7 chr1:74663200-74664400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:74663200-74664600 Active TSS HUES6 Cell Line embryonic stem cell
9 chr1:74663200-74664600 Active TSS iPS-15b Cell Line embryonic stem cell
10 chr1:74663200-74664600 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr1:74663200-74664600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:74663200-74664600 Active TSS Primary T helper naive cells fromperipheralblood blood
13 chr1:74663200-74664600 Active TSS Muscle Satellite Cultured Cells --
14 chr1:74663200-74664600 Active TSS Cortex derived primary cultured neurospheres brain
15 chr1:74663200-74664600 Active TSS Liver Liver
16 chr1:74663200-74664600 Active TSS Brain Angular Gyrus brain
17 chr1:74663200-74664600 Active TSS Brain Anterior Caudate brain
18 chr1:74663200-74664600 Active TSS Colon Smooth Muscle Colon
19 chr1:74663200-74664600 Active TSS Fetal Brain Female brain
20 chr1:74663200-74664600 Active TSS Fetal Intestine Small intestine
21 chr1:74663200-74664600 Active TSS Pancreatic Islets Pancreatic Islet
22 chr1:74663200-74664600 Active TSS Rectal Mucosa Donor 29 rectum
23 chr1:74663200-74664600 Active TSS NHEK skin
24 chr1:74663200-74664800 Active TSS ES-I3 Cell Line embryonic stem cell
25 chr1:74663200-74664800 Active TSS HUES64 Cell Line embryonic stem cell
26 chr1:74663200-74664800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:74663200-74664800 Active TSS Primary T cells fromperipheralblood blood
28 chr1:74663200-74664800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:74663200-74664800 Active TSS Brain Inferior Temporal Lobe brain
30 chr1:74663200-74664800 Active TSS Fetal Adrenal Gland Adrenal Gland
31 chr1:74663200-74664800 Active TSS Fetal Kidney kidney
32 chr1:74663200-74664800 Active TSS Fetal Stomach stomach
33 chr1:74663200-74664800 Active TSS Psoas Muscle Psoas
34 chr1:74663200-74664800 Active TSS HSMM muscle
35 chr1:74663200-74664800 Active TSS HSMMtube muscle
36 chr1:74663200-74664800 Active TSS NH-A brain
37 chr1:74663200-74665000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:74663200-74665000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:74663200-74665000 Active TSS Brain Cingulate Gyrus brain
40 chr1:74663200-74665000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
41 chr1:74663200-74665000 Active TSS Brain Substantia Nigra brain
42 chr1:74663200-74665000 Active TSS Colonic Mucosa Colon
43 chr1:74663200-74665000 Active TSS Fetal Intestine Large intestine
44 chr1:74663200-74665000 Active TSS Rectal Mucosa Donor 31 rectum
45 chr1:74663200-74665000 Active TSS Rectal Smooth Muscle rectum
46 chr1:74663200-74665000 Active TSS Skeletal Muscle Male skeletal muscle
47 chr1:74663200-74665000 Active TSS Stomach Smooth Muscle stomach
48 chr1:74663200-74665000 Active TSS NHLF lung
49 chr1:74663200-74665200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:74663200-74665400 Flanking Active TSS Primary B cells from cord blood blood

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Last update: Aug 31, 2015