The 2.0 version of rSNPBase

Variant report

Variant rs487917
Chromosome Location chr1:74668896-74668897
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:74664200-74672000 Weak transcription Lung lung
2 chr1:74664200-74672000 Weak transcription Spleen Spleen
3 chr1:74664200-74675200 Weak transcription Pancreas Pancrea
4 chr1:74664600-74671200 Weak transcription Fetal Intestine Small intestine
5 chr1:74664800-74669400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:74664800-74669600 Weak transcription Fetal Lung lung
7 chr1:74664800-74670800 Weak transcription Fetal Stomach stomach
8 chr1:74664800-74672000 Weak transcription Fetal Thymus thymus
9 chr1:74664800-74673600 Weak transcription NH-A brain
10 chr1:74664800-74674000 Weak transcription Fetal Kidney kidney
11 chr1:74664800-74674600 Weak transcription HSMMtube muscle
12 chr1:74664800-74676000 Weak transcription HSMM muscle
13 chr1:74664800-74680400 Weak transcription Fetal Brain Female brain
14 chr1:74664800-74688200 Weak transcription Psoas Muscle Psoas
15 chr1:74665000-74669000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:74665000-74670000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:74665000-74670200 Weak transcription Rectal Smooth Muscle rectum
18 chr1:74665000-74670200 Weak transcription Stomach Smooth Muscle stomach
19 chr1:74665000-74670200 Weak transcription NHLF lung
20 chr1:74665000-74670400 Weak transcription Fetal Muscle Leg muscle
21 chr1:74665000-74670400 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:74665000-74671000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:74665000-74671000 Weak transcription Brain Substantia Nigra brain
24 chr1:74665000-74671600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:74665000-74672000 Weak transcription HMEC breast
26 chr1:74665000-74672200 Weak transcription Colonic Mucosa Colon
27 chr1:74665000-74672200 Weak transcription HUVEC blood vessel
28 chr1:74665000-74672600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:74665000-74673000 Weak transcription Aorta Aorta
30 chr1:74665000-74675000 Weak transcription Osteobl bone
31 chr1:74665000-74675600 Weak transcription A549 lung
32 chr1:74665000-74677000 Weak transcription Right Ventricle heart
33 chr1:74665000-74690200 Weak transcription Brain Cingulate Gyrus brain
34 chr1:74665200-74672600 Weak transcription Brain Germinal Matrix brain
35 chr1:74665400-74670200 Weak transcription Ovary ovary
36 chr1:74665400-74670800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:74665400-74672400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:74665400-74675000 Weak transcription NHDF-Ad bronchial
39 chr1:74665400-74675200 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:74665400-74677200 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:74665600-74669800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:74665600-74670000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:74665600-74670200 Weak transcription Brain Hippocampus Middle brain
44 chr1:74665600-74670200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:74665600-74670200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:74665600-74670600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:74665600-74670600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:74665600-74671400 Strong transcription Adipose Nuclei Adipose
49 chr1:74665600-74671600 Weak transcription Brain Angular Gyrus brain
50 chr1:74665600-74671800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015