The 2.0 version of rSNPBase

Variant report

Variant rs553044
Chromosome Location chr1:74674573-74674574
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:74664200-74675200 Weak transcription Pancreas Pancrea
2 chr1:74664800-74674600 Weak transcription HSMMtube muscle
3 chr1:74664800-74676000 Weak transcription HSMM muscle
4 chr1:74664800-74680400 Weak transcription Fetal Brain Female brain
5 chr1:74664800-74688200 Weak transcription Psoas Muscle Psoas
6 chr1:74665000-74675000 Weak transcription Osteobl bone
7 chr1:74665000-74675600 Weak transcription A549 lung
8 chr1:74665000-74677000 Weak transcription Right Ventricle heart
9 chr1:74665000-74690200 Weak transcription Brain Cingulate Gyrus brain
10 chr1:74665400-74675000 Weak transcription NHDF-Ad bronchial
11 chr1:74665400-74675200 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:74665400-74677200 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:74665600-74677400 Weak transcription Brain Anterior Caudate brain
14 chr1:74665600-74680000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:74665600-74689200 Weak transcription Colon Smooth Muscle Colon
16 chr1:74665800-74674600 Weak transcription K562 blood
17 chr1:74666000-74675200 Weak transcription Primary T cells from cord blood blood
18 chr1:74670400-74674800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:74670600-74675600 Weak transcription Primary hematopoietic stem cells blood
20 chr1:74670800-74675200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:74671000-74674600 Weak transcription Placenta Placenta
22 chr1:74671200-74675600 Weak transcription Brain Hippocampus Middle brain
23 chr1:74671200-74679800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:74671200-74694800 Weak transcription Left Ventricle heart
25 chr1:74671400-74674800 Weak transcription Fetal Intestine Large intestine
26 chr1:74671400-74675200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:74671400-74675200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:74671400-74677400 Weak transcription Primary B cells from cord blood blood
29 chr1:74671400-74678400 Weak transcription Brain Substantia Nigra brain
30 chr1:74671400-74683000 Weak transcription Adipose Nuclei Adipose
31 chr1:74671400-74719400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:74671400-74751800 Weak transcription Ovary ovary
33 chr1:74671600-74674600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:74671600-74675200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:74671800-74676200 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:74672000-74675200 Weak transcription Fetal Lung lung
37 chr1:74672600-74678400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:74672600-74688000 Weak transcription Liver Liver
39 chr1:74672800-74675800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:74673000-74675400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:74673400-74675400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:74674000-74675600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:74674400-74675600 Enhancers Fetal Brain Male brain

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Last update: Aug 31, 2015