The 2.0 version of rSNPBase

Variant report

Variant rs944795
Chromosome Location chr1:74664948-74664949
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:74662800-74665800 Active TSS K562 blood
2 chr1:74663200-74665000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
3 chr1:74663200-74665000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:74663200-74665000 Active TSS Brain Cingulate Gyrus brain
5 chr1:74663200-74665000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
6 chr1:74663200-74665000 Active TSS Brain Substantia Nigra brain
7 chr1:74663200-74665000 Active TSS Colonic Mucosa Colon
8 chr1:74663200-74665000 Active TSS Fetal Intestine Large intestine
9 chr1:74663200-74665000 Active TSS Rectal Mucosa Donor 31 rectum
10 chr1:74663200-74665000 Active TSS Rectal Smooth Muscle rectum
11 chr1:74663200-74665000 Active TSS Skeletal Muscle Male skeletal muscle
12 chr1:74663200-74665000 Active TSS Stomach Smooth Muscle stomach
13 chr1:74663200-74665000 Active TSS NHLF lung
14 chr1:74663200-74665200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:74663200-74665400 Flanking Active TSS Primary B cells from cord blood blood
16 chr1:74663200-74665400 Active TSS Duodenum Smooth Muscle Duodenum
17 chr1:74663200-74665400 Active TSS GM12878-XiMat blood
18 chr1:74663200-74665600 Active TSS Right Atrium heart
19 chr1:74663400-74665000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:74663400-74665000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:74663400-74665000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:74663400-74665000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:74663400-74665000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:74663400-74665000 Active TSS Aorta Aorta
25 chr1:74663400-74665000 Active TSS Fetal Muscle Leg muscle
26 chr1:74663400-74665000 Active TSS Placenta Amnion Placenta Amnion
27 chr1:74663400-74665000 Active TSS Right Ventricle heart
28 chr1:74663400-74665000 Active TSS A549 lung
29 chr1:74663400-74665000 Active TSS Osteobl bone
30 chr1:74663400-74665400 Active TSS Ovary ovary
31 chr1:74663600-74665000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:74663600-74665000 Active TSS Duodenum Mucosa Duodenum
33 chr1:74663600-74665200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:74663600-74665400 Active TSS Primary monocytes fromperipheralblood blood
35 chr1:74664200-74665000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
36 chr1:74664200-74665000 Flanking Active TSS Brain Germinal Matrix brain
37 chr1:74664200-74665400 Flanking Active TSS Adipose Nuclei Adipose
38 chr1:74664200-74665600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr1:74664200-74667400 Weak transcription Left Ventricle heart
40 chr1:74664200-74672000 Weak transcription Lung lung
41 chr1:74664200-74672000 Weak transcription Spleen Spleen
42 chr1:74664200-74675200 Weak transcription Pancreas Pancrea
43 chr1:74664400-74665000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:74664400-74665200 Enhancers Primary neutrophils fromperipheralblood blood
45 chr1:74664400-74665200 Flanking Active TSS Primary T cells from cord blood blood
46 chr1:74664400-74665600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
47 chr1:74664400-74665800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:74664600-74665000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
49 chr1:74664600-74665000 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr1:74664600-74665000 Flanking Active TSS Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015