Variant report

Variant	rs1414981
Chromosome Location	chr6:133676470-133676471
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1414980	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2031596	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2184783	0.83[EUR][1000 genomes]
rs7750244	0.81[EUR][1000 genomes]
rs9373052	0.93[ASN][1000 genomes]
rs9375959	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9389074	0.83[EUR][1000 genomes]
rs9402504	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9402506	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9402508	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9493611	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9493613	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9493614	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133662200-133679200	Weak transcription	Psoas Muscle	Psoas
2	chr6:133668000-133679200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:133669000-133678600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:133673600-133687600	Weak transcription	Hela-S3	cervix
5	chr6:133674000-133689800	Weak transcription	A549	lung
6	chr6:133674600-133679800	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr6:133675200-133678800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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