Variant report

Variant	rs9402504
Chromosome Location	chr6:133670224-133670225
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10457606	0.82[ASN][1000 genomes]
rs1414981	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs211629	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs212826	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2184783	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7750244	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9375956	0.83[ASN][1000 genomes]
rs9375959	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9389074	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133662200-133679200	Weak transcription	Psoas Muscle	Psoas
2	chr6:133664600-133672400	Weak transcription	Hela-S3	cervix
3	chr6:133665000-133672600	Weak transcription	A549	lung
4	chr6:133668000-133679200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr6:133669000-133678600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:133669800-133671600	Enhancers	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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