Variant report

Variant	rs9493613
Chromosome Location	chr6:133701158-133701159
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1414980	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1414981	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2031596	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs211629	0.82[CEU][hapmap];0.83[JPT][hapmap]
rs212826	0.83[CEU][hapmap];0.83[JPT][hapmap]
rs2184783	0.83[JPT][hapmap]
rs6900552	0.83[CEU][hapmap]
rs7750244	0.82[CEU][hapmap];0.83[JPT][hapmap]
rs9373052	0.93[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs9375959	0.88[CEU][hapmap];1.00[YRI][hapmap];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9389074	0.82[CEU][hapmap];0.83[JPT][hapmap]
rs9402506	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9402508	0.93[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9493611	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9493614	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133684600-133717800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:133691600-133701200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:133699400-133705600	Weak transcription	Hela-S3	cervix
4	chr6:133700200-133701200	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr6:133700200-133701800	Enhancers	Psoas Muscle	Psoas
6	chr6:133701000-133703200	Weak transcription	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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