The 2.0 version of rSNPBase

Variant report

Variant rs1441416
Chromosome Location chr4:143738630-143738631
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143732000-143744600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr4:143732600-143745000 Weak transcription Left Ventricle heart
3 chr4:143732600-143749600 Weak transcription Right Ventricle heart
4 chr4:143736000-143740600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
5 chr4:143736400-143739000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr4:143736600-143739000 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr4:143736600-143739000 Enhancers Muscle Satellite Cultured Cells --
8 chr4:143736600-143739000 Enhancers Osteobl bone
9 chr4:143736800-143739000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr4:143736800-143739000 Enhancers Primary hematopoietic stem cells blood
11 chr4:143737000-143739000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr4:143737000-143739000 Enhancers HSMM muscle
13 chr4:143737800-143739600 Enhancers Primary T helper cells PMA-I stimulated --
14 chr4:143738000-143739000 Enhancers NHLF lung
15 chr4:143738000-143739400 Enhancers HMEC breast
16 chr4:143738000-143739600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr4:143738000-143740200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:143738200-143739200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr4:143738200-143739400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr4:143738200-143739400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr4:143738400-143738800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr4:143738400-143738800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr4:143738400-143738800 Enhancers Fetal Thymus thymus
24 chr4:143738400-143738800 Enhancers Rectal Smooth Muscle rectum
25 chr4:143738400-143738800 Flanking Active TSS Hela-S3 cervix
26 chr4:143738400-143738800 Flanking Active TSS NHDF-Ad bronchial
27 chr4:143738400-143739000 Enhancers Thymus Thymus
28 chr4:143738400-143739200 Enhancers A549 lung
29 chr4:143738400-143739400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr4:143738400-143739400 Enhancers Skeletal Muscle Male skeletal muscle
31 chr4:143738400-143739400 Enhancers NHEK skin
32 chr4:143738400-143739600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:143738400-143739600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr4:143738400-143739600 Flanking Active TSS Dnd41 blood
35 chr4:143738400-143740000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr4:143738400-143740200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:143738400-143740200 Enhancers Fetal Lung lung
38 chr4:143738400-143741200 Enhancers Fetal Heart heart
39 chr4:143738600-143738800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:143738600-143738800 Enhancers Brain Inferior Temporal Lobe brain
41 chr4:143738600-143738800 Flanking Active TSS Colon Smooth Muscle Colon
42 chr4:143738600-143738800 Enhancers Esophagus oesophagus
43 chr4:143738600-143738800 Enhancers Lung lung
44 chr4:143738600-143738800 Enhancers Small Intestine intestine
45 chr4:143738600-143739000 Enhancers Primary monocytes fromperipheralblood blood
46 chr4:143738600-143739000 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr4:143738600-143739000 Enhancers Right Atrium heart
48 chr4:143738600-143739000 Flanking Active TSS Stomach Smooth Muscle stomach
49 chr4:143738600-143739000 Enhancers HSMMtube muscle
50 chr4:143738600-143739200 Enhancers Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015