Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10024969	0.80[CEU][hapmap]
rs10520242	0.80[CEU][hapmap];0.85[GIH][hapmap]
rs12510199	0.86[CEU][hapmap]
rs12511715	0.89[CEU][hapmap]
rs12513314	0.80[CEU][hapmap]
rs12643395	0.80[CEU][hapmap]
rs12643816	0.80[CEU][hapmap]
rs12646897	0.80[CEU][hapmap]
rs12651320	0.80[CEU][hapmap];0.85[GIH][hapmap]
rs1347702	0.80[CEU][hapmap]
rs1437840	0.89[CEU][hapmap]
rs1540468	0.80[CEU][hapmap]
rs1540471	0.89[CEU][hapmap]
rs1540472	0.80[CEU][hapmap];0.85[GIH][hapmap]
rs17058683	0.80[CEU][hapmap]
rs17058705	0.89[CEU][hapmap]
rs17058736	0.89[CEU][hapmap]
rs17058752	0.80[CEU][hapmap]
rs17058802	0.80[CEU][hapmap]
rs17058882	0.88[CEU][hapmap]
rs17058886	0.80[CEU][hapmap]
rs180146	0.89[CEU][hapmap];0.90[CHB][hapmap];0.92[TSI][hapmap];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1946797	0.80[CEU][hapmap]
rs2043781	0.88[CEU][hapmap]
rs4695991	1.00[CEU][hapmap]
rs4696014	0.80[CEU][hapmap]
rs62330035	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6839760	0.82[CHD][hapmap]
rs747493	0.89[CEU][hapmap]
rs837196	0.80[CEU][hapmap];0.85[GIH][hapmap]
rs9312527	0.80[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031592	chr4:173112542-173662991	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537359	chr4:173112542-173662991	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534293	chr4:173121379-173606082	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173493200-173493600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood

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