Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10024969	0.90[CEU][hapmap]
rs10520242	0.90[CEU][hapmap]
rs12503858	0.89[JPT][hapmap]
rs12510199	0.86[CEU][hapmap]
rs12511707	0.89[CEU][hapmap]
rs12513314	0.90[CEU][hapmap]
rs12643395	0.90[CEU][hapmap]
rs12643816	0.90[CEU][hapmap]
rs12646897	0.90[CEU][hapmap]
rs12651320	0.90[CEU][hapmap]
rs13102637	0.89[JPT][hapmap]
rs13123441	0.93[JPT][hapmap]
rs1347702	0.90[CEU][hapmap]
rs1455130	0.89[CEU][hapmap];0.90[CHB][hapmap];0.92[TSI][hapmap];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1472370	0.88[JPT][hapmap]
rs1540468	0.90[CEU][hapmap]
rs1540472	0.90[CEU][hapmap]
rs17058683	0.90[CEU][hapmap]
rs17058752	0.90[CEU][hapmap]
rs17058802	0.90[CEU][hapmap]
rs17058886	0.90[CEU][hapmap]
rs17234582	0.89[JPT][hapmap]
rs1946797	0.90[CEU][hapmap]
rs35640087	0.84[CHD][hapmap]
rs4692921	0.85[CHD][hapmap];0.89[JPT][hapmap]
rs4695932	0.88[CEU][hapmap]
rs4696014	0.90[CEU][hapmap]
rs62330035	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6844200	0.88[CEU][hapmap]
rs7672525	0.85[CHD][hapmap];0.89[JPT][hapmap]
rs7696315	0.85[CHD][hapmap];0.89[JPT][hapmap]
rs837196	0.90[CEU][hapmap]
rs9312527	0.90[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031592	chr4:173112542-173662991	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537359	chr4:173112542-173662991	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534293	chr4:173121379-173606082	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173493600-173495400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr4:173493800-173495000	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr4:173494600-173495400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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