Variant report

Variant rs1457919
Chromosome Location chr4:20555216-20555217
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:20492000-20599800 Weak transcription Aorta Aorta
2 chr4:20511800-20576200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr4:20519400-20571000 Weak transcription Adipose Nuclei Adipose
4 chr4:20525200-20555400 Weak transcription Stomach Smooth Muscle stomach
5 chr4:20530400-20555400 Weak transcription NHEK skin
6 chr4:20533000-20578000 Weak transcription NHLF lung
7 chr4:20533800-20576200 Weak transcription Left Ventricle heart
8 chr4:20534800-20576400 Weak transcription Fetal Brain Male brain
9 chr4:20535800-20593600 Weak transcription Fetal Kidney kidney
10 chr4:20536600-20572200 Weak transcription Placenta Placenta
11 chr4:20536800-20618600 Weak transcription Spleen Spleen
12 chr4:20547000-20576000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr4:20549200-20568800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr4:20550000-20561400 Strong transcription NHDF-Ad bronchial
15 chr4:20550400-20561000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:20552000-20557600 Strong transcription Fetal Lung lung
17 chr4:20552400-20555400 Strong transcription Osteobl bone
18 chr4:20552400-20561000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr4:20552600-20556000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr4:20552600-20558600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr4:20552800-20555600 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr4:20552800-20556000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr4:20553000-20569200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:20553200-20555400 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr4:20553400-20556000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:20553600-20565400 Weak transcription Colon Smooth Muscle Colon
27 chr4:20553800-20555400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr4:20553800-20555800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:20554000-20557200 Weak transcription Lung lung
30 chr4:20554200-20576600 Weak transcription Fetal Stomach stomach
31 chr4:20554800-20555400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr4:20554800-20555800 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr4:20554800-20556000 Strong transcription Muscle Satellite Cultured Cells --
34 chr4:20555000-20557400 Weak transcription Brain Anterior Caudate brain
35 chr4:20555200-20555400 Enhancers HUES6 Cell Line embryonic stem cell
36 chr4:20555200-20557800 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr4:20555200-20585600 Weak transcription Placenta Amnion Placenta Amnion

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