Variant report

Variant rs1480940
Chromosome Location chr4:120457682-120457683
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:120376400-120471600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr4:120377600-120501200 Weak transcription Pancreas Pancrea
3 chr4:120420200-120485400 Weak transcription Fetal Brain Male brain
4 chr4:120434600-120474400 Weak transcription Gastric stomach
5 chr4:120434800-120464800 Weak transcription Lung lung
6 chr4:120435000-120457800 Weak transcription Right Ventricle heart
7 chr4:120435000-120473200 Weak transcription Esophagus oesophagus
8 chr4:120435000-120487600 Weak transcription Colonic Mucosa Colon
9 chr4:120436200-120473800 Weak transcription Fetal Brain Female brain
10 chr4:120436600-120471600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:120436800-120474000 Weak transcription Thymus Thymus
12 chr4:120437600-120474200 Weak transcription Brain Substantia Nigra brain
13 chr4:120437800-120479200 Weak transcription Brain Hippocampus Middle brain
14 chr4:120438200-120484800 Weak transcription Brain Anterior Caudate brain
15 chr4:120439400-120474200 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr4:120440000-120474000 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr4:120440400-120457800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr4:120440600-120478200 Weak transcription Primary B cells from cord blood blood
19 chr4:120441200-120476200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr4:120441600-120472600 Weak transcription Primary T cells fromperipheralblood blood
21 chr4:120442200-120474200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr4:120442800-120484600 Weak transcription Psoas Muscle Psoas
23 chr4:120443000-120458200 Weak transcription Adipose Nuclei Adipose
24 chr4:120443400-120458200 Weak transcription Left Ventricle heart
25 chr4:120444600-120459400 Weak transcription Placenta Placenta
26 chr4:120447400-120484800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr4:120447600-120457800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:120447600-120463200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr4:120448000-120484800 Weak transcription Fetal Heart heart
30 chr4:120448400-120457800 Weak transcription Ovary ovary
31 chr4:120448400-120458000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr4:120448400-120465000 Weak transcription HSMMtube muscle
33 chr4:120448600-120457800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr4:120448600-120457800 Weak transcription HSMM muscle
35 chr4:120448600-120458200 Weak transcription NH-A brain
36 chr4:120448600-120458600 Weak transcription Aorta Aorta
37 chr4:120448600-120458600 Weak transcription Rectal Smooth Muscle rectum
38 chr4:120449200-120458600 Weak transcription Colon Smooth Muscle Colon
39 chr4:120449400-120473600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr4:120451200-120458000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr4:120451600-120485200 Weak transcription Brain Angular Gyrus brain
42 chr4:120452800-120458000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:120452800-120465400 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr4:120453800-120461200 Weak transcription NHEK skin
45 chr4:120454600-120457800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr4:120455200-120457800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
47 chr4:120455600-120459200 Weak transcription Primary T cells from cord blood blood
48 chr4:120455600-120483800 Weak transcription Brain Cingulate Gyrus brain
49 chr4:120456000-120459200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr4:120456200-120488800 Weak transcription H9 Cell Line embryonic stem cell

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