Variant report

Variant rs1512453
Chromosome Location chr6:127804617-127804618
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:127781000-127804800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr6:127783800-127805000 Strong transcription Fetal Brain Female brain
3 chr6:127786600-127805200 Weak transcription Stomach Smooth Muscle stomach
4 chr6:127786800-127804800 Weak transcription Colon Smooth Muscle Colon
5 chr6:127791200-127804800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr6:127793600-127805000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr6:127797200-127807600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:127797400-127805000 Strong transcription Brain Germinal Matrix brain
9 chr6:127797400-127805000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:127799000-127805000 Weak transcription Duodenum Mucosa Duodenum
11 chr6:127801600-127805000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:127802000-127804800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:127802000-127809800 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:127802200-127805000 Enhancers Cortex derived primary cultured neurospheres brain
15 chr6:127802200-127806600 Enhancers Hela-S3 cervix
16 chr6:127802400-127804800 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr6:127802400-127806000 Enhancers H1 Cell Line embryonic stem cell
18 chr6:127803000-127804800 Weak transcription Fetal Brain Male brain
19 chr6:127803000-127805200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:127803000-127810800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr6:127803200-127804800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:127803600-127805000 Enhancers Osteobl bone
23 chr6:127803600-127806000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr6:127803600-127811400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr6:127803800-127804800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:127803800-127804800 Weak transcription Brain Hippocampus Middle brain
27 chr6:127803800-127805000 Weak transcription HUVEC blood vessel
28 chr6:127803800-127806000 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:127804000-127804800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr6:127804000-127805200 Enhancers NH-A brain
31 chr6:127804200-127804800 Enhancers Brain Anterior Caudate brain
32 chr6:127804200-127805000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:127804200-127805400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
34 chr6:127804400-127804800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr6:127804400-127804800 Enhancers Primary T helper cells PMA-I stimulated --
36 chr6:127804400-127804800 Enhancers Ovary ovary
37 chr6:127804400-127804800 Enhancers Pancreas Pancrea
38 chr6:127804400-127805000 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr6:127804400-127805000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr6:127804400-127805000 Enhancers Muscle Satellite Cultured Cells --
41 chr6:127804400-127805000 Enhancers Brain Angular Gyrus brain
42 chr6:127804400-127805000 Enhancers Skeletal Muscle Female skeletal muscle
43 chr6:127804400-127805000 Enhancers A549 lung
44 chr6:127804400-127805000 Enhancers HSMMtube muscle
45 chr6:127804400-127805000 Enhancers NHLF lung
46 chr6:127804400-127805200 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr6:127804400-127805200 Enhancers H9 Cell Line embryonic stem cell
48 chr6:127804400-127805200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr6:127804400-127805400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:127804600-127804800 Enhancers HUES64 Cell Line embryonic stem cell

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