The 2.0 version of rSNPBase

Variant report

Variant rs6904065
Chromosome Location chr6:127638706-127638707
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:127605000-127660800 Weak transcription Hela-S3 cervix
2 chr6:127608800-127646800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:127608800-127646800 Weak transcription Lung lung
4 chr6:127608800-127652800 Weak transcription Esophagus oesophagus
5 chr6:127608800-127653600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:127608800-127653600 Weak transcription Pancreas Pancrea
7 chr6:127608800-127654600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr6:127608800-127661400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:127608800-127663600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:127608800-127663600 Weak transcription Gastric stomach
11 chr6:127609000-127646200 Weak transcription Psoas Muscle Psoas
12 chr6:127611400-127645600 Weak transcription Duodenum Mucosa Duodenum
13 chr6:127613000-127640000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr6:127613000-127661000 Weak transcription Small Intestine intestine
15 chr6:127613400-127646200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr6:127614600-127659200 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr6:127616600-127645800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr6:127618800-127647200 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr6:127620400-127647000 Weak transcription Left Ventricle heart
20 chr6:127621800-127646400 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:127621800-127661000 Weak transcription Fetal Heart heart
22 chr6:127622000-127645200 Weak transcription HMEC breast
23 chr6:127622000-127645600 Weak transcription HSMMtube muscle
24 chr6:127622000-127646800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:127622000-127646800 Weak transcription Aorta Aorta
26 chr6:127622000-127649400 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr6:127622000-127661400 Weak transcription H1 Cell Line embryonic stem cell
28 chr6:127622000-127661400 Weak transcription NHEK skin
29 chr6:127622800-127661400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr6:127622800-127662600 Weak transcription Fetal Brain Male brain
31 chr6:127623000-127649200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr6:127624000-127646400 Weak transcription HUVEC blood vessel
33 chr6:127625600-127646000 Weak transcription Thymus Thymus
34 chr6:127625600-127661400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:127626000-127646000 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:127627400-127639200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr6:127627400-127659000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr6:127627800-127645800 Weak transcription Brain Germinal Matrix brain
39 chr6:127627800-127646800 Weak transcription Fetal Intestine Small intestine
40 chr6:127628000-127653000 Weak transcription Brain Hippocampus Middle brain
41 chr6:127629400-127644800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr6:127629800-127661200 Weak transcription A549 lung
43 chr6:127630000-127638800 Weak transcription Stomach Smooth Muscle stomach
44 chr6:127630200-127642600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr6:127630400-127646000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr6:127630400-127647200 Weak transcription Brain Inferior Temporal Lobe brain
47 chr6:127630600-127647200 Weak transcription Brain Cingulate Gyrus brain
48 chr6:127630800-127649200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:127630800-127649600 Strong transcription Dnd41 blood
50 chr6:127630800-127649800 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015