Variant report

Variant	rs1520191
Chromosome Location	chr12:103662895-103662896
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10778229	0.84[CEU][hapmap];0.93[EUR][1000 genomes]
rs10860978	0.89[CEU][hapmap]
rs11111510	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11830344	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs12311525	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1464321	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1520190	0.95[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1915110	0.90[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2373979	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2888710	0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4379920	0.80[ASN][1000 genomes]
rs6419384	0.89[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6539064	0.84[CEU][hapmap];0.84[EUR][1000 genomes]
rs7134630	0.84[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7138383	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs7305590	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7308188	0.89[CEU][hapmap];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7488867	0.90[CEU][hapmap];0.85[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103662400-103663000	Enhancers	Dnd41	blood
2	chr12:103662600-103663000	Enhancers	Brain Germinal Matrix	brain
3	chr12:103662600-103663600	Enhancers	Primary T cells fromperipheralblood	blood
4	chr12:103662800-103663000	Enhancers	Thymus	Thymus
5	chr12:103662800-103666200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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