The 2.0 version of rSNPBase

Variant report

Variant rs152369
Chromosome Location chr5:115188267-115188268
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115178600-115192200 Weak transcription Gastric stomach
2 chr5:115178800-115192200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:115179000-115189600 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:115179000-115194800 Weak transcription HSMMtube muscle
5 chr5:115179400-115192200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr5:115179800-115193000 Weak transcription Primary T cells from cord blood blood
7 chr5:115179800-115205000 Weak transcription HSMM muscle
8 chr5:115180200-115192600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr5:115180200-115192600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr5:115180400-115189200 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr5:115180600-115193000 Weak transcription Fetal Stomach stomach
12 chr5:115181400-115188800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr5:115181400-115189800 Weak transcription Primary hematopoietic stem cells blood
14 chr5:115182000-115189000 Weak transcription Primary B cells from cord blood blood
15 chr5:115183400-115191000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:115183400-115193200 Weak transcription HMEC breast
17 chr5:115183400-115193400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr5:115183600-115192200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:115185400-115188800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:115185400-115195200 Weak transcription Esophagus oesophagus
21 chr5:115185600-115190800 Weak transcription Right Ventricle heart
22 chr5:115185600-115192200 Weak transcription Left Ventricle heart
23 chr5:115185600-115192200 Weak transcription Pancreas Pancrea
24 chr5:115185600-115192800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr5:115185600-115218600 Weak transcription Lung lung
26 chr5:115186400-115188400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr5:115186600-115189200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr5:115186800-115194000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr5:115187000-115192200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr5:115187000-115192200 Weak transcription Liver Liver
31 chr5:115187000-115192200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:115187000-115192600 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr5:115187000-115193800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:115187200-115189200 Weak transcription Fetal Intestine Large intestine
35 chr5:115187200-115189400 Weak transcription A549 lung
36 chr5:115187200-115189600 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr5:115187200-115192000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:115187200-115192200 Weak transcription Adipose Nuclei Adipose
39 chr5:115187200-115192200 Weak transcription Aorta Aorta
40 chr5:115187200-115192200 Weak transcription Colon Smooth Muscle Colon
41 chr5:115187200-115192400 Weak transcription NHEK skin
42 chr5:115187200-115192600 Weak transcription Fetal Heart heart
43 chr5:115187200-115192600 Weak transcription Osteobl bone
44 chr5:115187200-115206600 Weak transcription Ovary ovary
45 chr5:115187400-115192000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr5:115187400-115193600 Weak transcription Stomach Smooth Muscle stomach
47 chr5:115187400-115206200 Weak transcription Brain Hippocampus Middle brain
48 chr5:115187600-115189600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr5:115187600-115191800 Weak transcription Fetal Lung lung
50 chr5:115187600-115192600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015