The 2.0 version of rSNPBase

Variant report

Variant rs7707539
Chromosome Location chr5:115205224-115205225
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115185600-115218600 Weak transcription Lung lung
2 chr5:115187200-115206600 Weak transcription Ovary ovary
3 chr5:115187400-115206200 Weak transcription Brain Hippocampus Middle brain
4 chr5:115189800-115218600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:115189800-115235800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr5:115190400-115206000 Weak transcription Primary B cells from cord blood blood
7 chr5:115191000-115223000 Weak transcription Right Ventricle heart
8 chr5:115192400-115207600 Weak transcription Pancreas Pancrea
9 chr5:115192800-115206000 Weak transcription Left Ventricle heart
10 chr5:115193200-115207400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr5:115193200-115239000 Weak transcription Gastric stomach
12 chr5:115193600-115234600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr5:115194000-115206000 Weak transcription Fetal Lung lung
14 chr5:115194000-115206000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr5:115194000-115206200 Weak transcription Fetal Kidney kidney
16 chr5:115194000-115211000 Weak transcription HepG2 liver
17 chr5:115194200-115206000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr5:115194200-115206200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:115194200-115209000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr5:115194400-115206000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr5:115194400-115218000 Weak transcription Fetal Intestine Small intestine
22 chr5:115194400-115220800 Weak transcription Rectal Smooth Muscle rectum
23 chr5:115195000-115206000 Weak transcription Fetal Intestine Large intestine
24 chr5:115195200-115206000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr5:115195200-115206000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:115195200-115206200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr5:115195400-115205400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:115195400-115205600 Weak transcription Adipose Nuclei Adipose
29 chr5:115195400-115209000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr5:115195400-115263200 Weak transcription Aorta Aorta
31 chr5:115195600-115205800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr5:115195600-115206000 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr5:115195600-115208600 Weak transcription Osteobl bone
34 chr5:115195600-115214600 Weak transcription HSMMtube muscle
35 chr5:115195800-115206000 Weak transcription NHDF-Ad bronchial
36 chr5:115196000-115206000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:115196000-115206000 Weak transcription Placenta Placenta
38 chr5:115196000-115211200 Weak transcription Psoas Muscle Psoas
39 chr5:115196000-115233600 Weak transcription Esophagus oesophagus
40 chr5:115196600-115205400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:115199600-115205400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr5:115200000-115205400 Weak transcription Primary B cells from peripheral blood blood
43 chr5:115200000-115206000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr5:115200200-115206000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:115200200-115209000 Weak transcription K562 blood
46 chr5:115200400-115205400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr5:115200400-115208600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr5:115200400-115218200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr5:115200600-115206000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr5:115200600-115209000 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015