The 2.0 version of rSNPBase

Variant report

Variant rs7713314
Chromosome Location chr5:115192630-115192631
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115179000-115194800 Weak transcription HSMMtube muscle
2 chr5:115179800-115193000 Weak transcription Primary T cells from cord blood blood
3 chr5:115179800-115205000 Weak transcription HSMM muscle
4 chr5:115180600-115193000 Weak transcription Fetal Stomach stomach
5 chr5:115183400-115193200 Weak transcription HMEC breast
6 chr5:115183400-115193400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr5:115185400-115195200 Weak transcription Esophagus oesophagus
8 chr5:115185600-115192800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr5:115185600-115218600 Weak transcription Lung lung
10 chr5:115186800-115194000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:115187000-115193800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr5:115187200-115206600 Weak transcription Ovary ovary
13 chr5:115187400-115193600 Weak transcription Stomach Smooth Muscle stomach
14 chr5:115187400-115206200 Weak transcription Brain Hippocampus Middle brain
15 chr5:115189600-115193400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr5:115189800-115193400 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr5:115189800-115218600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr5:115189800-115235800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr5:115190000-115193000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:115190000-115193000 Weak transcription A549 lung
21 chr5:115190000-115193200 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr5:115190000-115193800 Weak transcription Primary B cells from peripheral blood blood
23 chr5:115190000-115198600 Weak transcription Primary hematopoietic stem cells blood
24 chr5:115190200-115193000 Weak transcription HepG2 liver
25 chr5:115190400-115193600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr5:115190400-115206000 Weak transcription Primary B cells from cord blood blood
27 chr5:115191000-115193400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr5:115191000-115194200 Enhancers Primary monocytes fromperipheralblood blood
29 chr5:115191000-115223000 Weak transcription Right Ventricle heart
30 chr5:115191200-115192800 Enhancers Placenta Placenta
31 chr5:115191400-115194000 Enhancers Monocytes-CD14+_RO01746 blood
32 chr5:115191400-115194400 Enhancers Fetal Intestine Large intestine
33 chr5:115191400-115194600 Enhancers Primary neutrophils fromperipheralblood blood
34 chr5:115191400-115195800 Enhancers Hela-S3 cervix
35 chr5:115191600-115196000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:115191600-115197200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:115191800-115193000 Enhancers Fetal Lung lung
38 chr5:115191800-115194400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr5:115192000-115193200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr5:115192000-115193600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr5:115192000-115194000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr5:115192000-115194000 Enhancers Duodenum Mucosa Duodenum
43 chr5:115192000-115194200 Enhancers Duodenum Smooth Muscle Duodenum
44 chr5:115192000-115194200 Enhancers Small Intestine intestine
45 chr5:115192000-115194200 Enhancers HUVEC blood vessel
46 chr5:115192000-115195600 Enhancers Muscle Satellite Cultured Cells --
47 chr5:115192200-115192800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr5:115192200-115192800 Enhancers Left Ventricle heart
49 chr5:115192200-115192800 Enhancers Right Atrium heart
50 chr5:115192200-115193000 Enhancers Aorta Aorta

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Last update: Aug 31, 2015