The 2.0 version of rSNPBase

Variant report

Variant rs35903246
Chromosome Location chr5:115165847-115165848
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115152800-115171200 Weak transcription Rectal Smooth Muscle rectum
2 chr5:115153200-115169600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr5:115153600-115172400 Weak transcription Fetal Brain Male brain
4 chr5:115154400-115169600 Weak transcription Brain Angular Gyrus brain
5 chr5:115154600-115173000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr5:115154800-115169200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr5:115155000-115169200 Weak transcription Brain Anterior Caudate brain
8 chr5:115155000-115169800 Weak transcription Brain Cingulate Gyrus brain
9 chr5:115155000-115174400 Weak transcription Fetal Heart heart
10 chr5:115155200-115167200 Weak transcription Brain Substantia Nigra brain
11 chr5:115155200-115169400 Weak transcription Brain Germinal Matrix brain
12 chr5:115157600-115171000 Weak transcription Thymus Thymus
13 chr5:115159000-115169000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr5:115160000-115169600 Weak transcription Psoas Muscle Psoas
15 chr5:115160600-115169800 Weak transcription Left Ventricle heart
16 chr5:115161200-115166200 Weak transcription HMEC breast
17 chr5:115161400-115169600 Weak transcription Ovary ovary
18 chr5:115161800-115176200 Weak transcription Gastric stomach
19 chr5:115162000-115166200 Weak transcription Fetal Intestine Small intestine
20 chr5:115162000-115174400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr5:115162000-115176200 Weak transcription H9 Cell Line embryonic stem cell
22 chr5:115162000-115176600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:115162200-115167200 Weak transcription K562 blood
24 chr5:115162400-115171800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr5:115162600-115175600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr5:115162800-115168200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr5:115162800-115170400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr5:115163000-115168000 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr5:115163000-115169600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr5:115163000-115171000 Weak transcription Hela-S3 cervix
31 chr5:115163000-115173400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr5:115163000-115176400 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr5:115163200-115168200 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr5:115163200-115171000 Weak transcription HSMMtube muscle
35 chr5:115163200-115174000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:115163400-115167200 Strong transcription Fetal Muscle Leg muscle
37 chr5:115163400-115167600 Strong transcription Fetal Muscle Trunk muscle
38 chr5:115163400-115168200 Strong transcription NH-A brain
39 chr5:115163400-115173800 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr5:115163400-115173800 Strong transcription Duodenum Mucosa Duodenum
41 chr5:115163400-115173800 Strong transcription NHDF-Ad bronchial
42 chr5:115163400-115174200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr5:115163600-115168200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr5:115163600-115171200 Weak transcription Placenta Amnion Placenta Amnion
45 chr5:115163600-115173200 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr5:115163800-115167400 Strong transcription Primary B cells from peripheral blood blood
47 chr5:115163800-115167400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr5:115163800-115167600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:115163800-115167800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr5:115163800-115168200 Strong transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015