Variant report

Variant	rs1541662
Chromosome Location	chr4:78266438-78266439
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:78257188..78259774-chr4:78266144..78268332,2	K562	blood:

Extended variants
information (count: 445 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:435)

rs_ID	r²[population]
rs10000129	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10000161	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10000241	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10001302	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10001554	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10002514	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10002520	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10002804	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10003077	0.96[EUR][1000 genomes]
rs10003257	0.96[EUR][1000 genomes]
rs10003385	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10003395	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10003480	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10003802	0.95[EUR][1000 genomes]
rs10006535	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10006656	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10007003	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10007844	0.89[EUR][1000 genomes]
rs10007856	0.93[EUR][1000 genomes]
rs10009287	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10010146	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10010526	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10011183	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10011281	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10011734	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10012774	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10012879	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10013131	0.96[EUR][1000 genomes]
rs10013307	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10014177	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10014353	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10014372	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10014811	0.84[EUR][1000 genomes]
rs10014990	0.80[EUR][1000 genomes]
rs10015460	0.96[EUR][1000 genomes]
rs10015610	0.82[EUR][1000 genomes]
rs10016564	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10016698	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10016991	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017089	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017165	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017537	0.98[EUR][1000 genomes]
rs10017551	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017552	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017634	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10017995	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10018013	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10018749	0.94[EUR][1000 genomes]
rs10018841	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10018950	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10019113	0.84[EUR][1000 genomes]
rs10022709	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10023087	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10023257	0.93[EUR][1000 genomes]
rs10023503	0.96[EUR][1000 genomes]
rs10023801	0.94[EUR][1000 genomes]
rs10024574	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10025487	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10025513	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10025674	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10025802	0.95[EUR][1000 genomes]
rs10026063	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10026632	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10027556	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10029187	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10031446	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10033434	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10033519	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10034292	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10155431	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10440383	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10470969	0.96[EUR][1000 genomes]
rs10470970	0.96[EUR][1000 genomes]
rs10470971	0.96[EUR][1000 genomes]
rs10518169	0.96[EUR][1000 genomes]
rs10518172	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10518173	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10518174	0.93[EUR][1000 genomes]
rs11536332	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1160044	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1160276	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12641807	0.95[EUR][1000 genomes]
rs12642435	0.96[EUR][1000 genomes]
rs12642499	0.96[EUR][1000 genomes]
rs12642870	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12643064	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12643399	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12643786	0.96[EUR][1000 genomes]
rs12645161	0.96[EUR][1000 genomes]
rs12645407	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12645430	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12645787	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12645827	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12646196	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12647087	0.95[EUR][1000 genomes]
rs12649117	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12650116	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12650208	0.85[EUR][1000 genomes]
rs12650240	0.95[EUR][1000 genomes]
rs12650269	0.95[EUR][1000 genomes]
rs12650778	0.96[EUR][1000 genomes]
rs12650901	0.95[EUR][1000 genomes]
rs12651380	0.96[EUR][1000 genomes]
rs12651435	0.96[EUR][1000 genomes]
rs13434612	0.94[EUR][1000 genomes]
rs13434625	0.95[EUR][1000 genomes]
rs13434629	0.95[EUR][1000 genomes]
rs13435669	0.95[EUR][1000 genomes]
rs13435670	0.95[EUR][1000 genomes]
rs1541661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17002493	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17394817	0.96[EUR][1000 genomes]
rs17394978	0.95[EUR][1000 genomes]
rs17395041	0.96[EUR][1000 genomes]
rs17395298	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17395748	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17395769	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396195	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396202	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396361	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396596	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396701	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17396819	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17397057	0.95[EUR][1000 genomes]
rs17397078	0.94[EUR][1000 genomes]
rs17397262	0.95[EUR][1000 genomes]
rs17397429	0.96[EUR][1000 genomes]
rs17399165	0.96[EUR][1000 genomes]
rs17399199	0.96[EUR][1000 genomes]
rs17400808	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17400975	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17401023	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17401183	0.95[EUR][1000 genomes]
rs17401343	0.95[EUR][1000 genomes]
rs17401378	0.95[EUR][1000 genomes]
rs17401553	0.96[EUR][1000 genomes]
rs17401756	0.96[EUR][1000 genomes]
rs17402068	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17402277	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17410343	0.96[EUR][1000 genomes]
rs17410608	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17410664	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17410861	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1862356	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1862359	0.95[EUR][1000 genomes]
rs1988614	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2007495	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2007496	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2042229	0.96[EUR][1000 genomes]
rs2042230	0.96[EUR][1000 genomes]
rs2042231	0.96[EUR][1000 genomes]
rs2042232	0.93[EUR][1000 genomes]
rs2042233	0.96[EUR][1000 genomes]
rs2059102	0.96[EUR][1000 genomes]
rs2059103	0.96[EUR][1000 genomes]
rs2059104	0.96[EUR][1000 genomes]
rs2059105	0.96[EUR][1000 genomes]
rs2059106	0.96[EUR][1000 genomes]
rs2059108	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2080977	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2080978	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2080979	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2080980	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2098653	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2098654	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2112630	0.96[EUR][1000 genomes]
rs2112631	0.96[EUR][1000 genomes]
rs2194116	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2194117	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2194122	0.95[EUR][1000 genomes]
rs2194123	0.95[EUR][1000 genomes]
rs2194126	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2194127	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2194128	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2194129	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2194130	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28371056	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28376004	0.93[EUR][1000 genomes]
rs28393222	0.80[EUR][1000 genomes]
rs28409053	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28440089	0.96[EUR][1000 genomes]
rs28446916	0.96[EUR][1000 genomes]
rs28458306	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28482007	0.96[EUR][1000 genomes]
rs28505629	0.96[EUR][1000 genomes]
rs28507973	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28515750	0.80[EUR][1000 genomes]
rs28522343	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28523977	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28526611	0.96[EUR][1000 genomes]
rs28528846	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28529275	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28563974	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28566794	0.96[EUR][1000 genomes]
rs28577247	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28581617	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28589297	0.93[EUR][1000 genomes]
rs28605209	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28622496	0.93[EUR][1000 genomes]
rs28629307	0.96[EUR][1000 genomes]
rs28650115	0.96[EUR][1000 genomes]
rs28653483	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28657009	0.94[EUR][1000 genomes]
rs2866042	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2866043	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2866044	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2866045	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2866047	0.96[EUR][1000 genomes]
rs2866048	0.84[EUR][1000 genomes]
rs2866049	0.85[EUR][1000 genomes]
rs2866050	0.95[EUR][1000 genomes]
rs28665694	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28669874	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28696354	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28701154	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28713409	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28720869	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28726671	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28733036	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28740917	0.95[EUR][1000 genomes]
rs28741683	0.96[EUR][1000 genomes]
rs28762403	0.96[EUR][1000 genomes]
rs28764902	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28765524	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28784661	0.82[AMR][1000 genomes]
rs28794557	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28800921	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28804728	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28816218	0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28827589	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28832364	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28838641	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28840788	0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28851267	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28854571	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28860491	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28864437	0.96[EUR][1000 genomes]
rs28865902	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28869537	0.96[EUR][1000 genomes]
rs28873235	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28882134	0.95[EUR][1000 genomes]
rs28882408	0.98[EUR][1000 genomes]
rs28884597	0.96[EUR][1000 genomes]
rs28894736	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2903169	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2903173	0.96[EUR][1000 genomes]
rs2903174	0.96[EUR][1000 genomes]
rs34386122	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34803449	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs36117998	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3902526	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241615	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241616	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241617	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241618	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4241619	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4269199	0.88[EUR][1000 genomes]
rs4273491	0.96[EUR][1000 genomes]
rs4321659	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4330372	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4367201	0.95[EUR][1000 genomes]
rs4412015	0.96[EUR][1000 genomes]
rs4441779	0.96[EUR][1000 genomes]
rs4444852	0.88[EUR][1000 genomes]
rs4464596	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4466064	0.96[EUR][1000 genomes]
rs4466065	0.96[EUR][1000 genomes]
rs4466066	0.96[EUR][1000 genomes]
rs4475169	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4484325	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4529080	0.96[EUR][1000 genomes]
rs4538516	0.95[EUR][1000 genomes]
rs4590066	0.95[EUR][1000 genomes]
rs4608831	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4616777	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859479	0.96[EUR][1000 genomes]
rs4859481	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859482	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859483	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859484	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859485	0.96[EUR][1000 genomes]
rs4859486	0.96[EUR][1000 genomes]
rs4859488	0.96[EUR][1000 genomes]
rs4859490	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859491	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859764	0.96[EUR][1000 genomes]
rs4859765	0.96[EUR][1000 genomes]
rs4859766	0.96[EUR][1000 genomes]
rs4859768	0.96[EUR][1000 genomes]
rs4859770	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859771	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859772	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859773	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859774	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859775	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859776	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859777	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859779	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859780	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4859781	0.96[EUR][1000 genomes]
rs4859782	0.96[EUR][1000 genomes]
rs4859783	0.95[EUR][1000 genomes]
rs4859784	0.95[EUR][1000 genomes]
rs4859785	0.95[EUR][1000 genomes]
rs4859786	0.95[EUR][1000 genomes]
rs4859787	0.95[EUR][1000 genomes]
rs4859790	0.96[EUR][1000 genomes]
rs4859791	0.85[EUR][1000 genomes]
rs4859792	0.96[EUR][1000 genomes]
rs4859793	0.96[EUR][1000 genomes]
rs4859794	0.95[EUR][1000 genomes]
rs4859795	0.96[EUR][1000 genomes]
rs4859796	0.96[EUR][1000 genomes]
rs4859797	0.96[EUR][1000 genomes]
rs4859798	0.96[EUR][1000 genomes]
rs4859799	0.96[EUR][1000 genomes]
rs4859800	0.96[EUR][1000 genomes]
rs4859801	0.96[EUR][1000 genomes]
rs4859802	0.96[EUR][1000 genomes]
rs4859803	0.96[EUR][1000 genomes]
rs4859804	0.96[EUR][1000 genomes]
rs4859805	0.96[EUR][1000 genomes]
rs4859807	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859808	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859809	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859810	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859813	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4859814	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859815	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859818	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55798502	0.95[EUR][1000 genomes]
rs56115488	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56186979	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56199515	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56211902	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56258723	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56694835	0.96[EUR][1000 genomes]
rs56753678	0.95[EUR][1000 genomes]
rs56860489	0.90[EUR][1000 genomes]
rs56882826	0.95[EUR][1000 genomes]
rs57044172	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57123831	0.96[EUR][1000 genomes]
rs57183968	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57593446	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57827785	0.95[EUR][1000 genomes]
rs58165890	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58209644	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58303783	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58481193	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58720287	0.84[EUR][1000 genomes]
rs58741638	0.83[EUR][1000 genomes]
rs58921141	0.95[EUR][1000 genomes]
rs59155004	0.84[EUR][1000 genomes]
rs59423033	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59553748	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59680999	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60307733	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60378562	0.95[EUR][1000 genomes]
rs60394286	0.94[EUR][1000 genomes]
rs60701709	0.91[EUR][1000 genomes]
rs61329326	0.95[EUR][1000 genomes]
rs61687942	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6812863	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6816489	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6817367	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6818016	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6818028	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6818202	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6836179	0.96[EUR][1000 genomes]
rs6843119	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6846070	0.81[AMR][1000 genomes]
rs723972	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72856841	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72856846	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72856847	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72856863	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72866448	0.96[EUR][1000 genomes]
rs72866450	0.96[EUR][1000 genomes]
rs72866480	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72869734	0.95[EUR][1000 genomes]
rs72869739	0.94[EUR][1000 genomes]
rs72869741	0.95[EUR][1000 genomes]
rs72869742	0.95[EUR][1000 genomes]
rs72869744	0.95[EUR][1000 genomes]
rs72869745	0.95[EUR][1000 genomes]
rs72869746	0.94[EUR][1000 genomes]
rs7375828	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7375829	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7375834	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7376348	0.96[EUR][1000 genomes]
rs7376994	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7377173	0.95[EUR][1000 genomes]
rs73827303	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73827312	0.93[EUR][1000 genomes]
rs73829714	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7435398	0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7442492	0.90[EUR][1000 genomes]
rs752062	0.96[EUR][1000 genomes]
rs752063	0.96[EUR][1000 genomes]
rs752064	0.85[EUR][1000 genomes]
rs888981	0.94[EUR][1000 genomes]
rs888982	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs888983	0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs918496	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs918497	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9307260	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9307261	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs933657	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs960507	0.94[EUR][1000 genomes]
rs960508	0.95[EUR][1000 genomes]
rs9761673	0.86[EUR][1000 genomes]
rs9761675	0.89[EUR][1000 genomes]
rs9761683	0.86[EUR][1000 genomes]
rs9762672	0.90[EUR][1000 genomes]
rs9884375	0.96[EUR][1000 genomes]
rs9884379	0.96[EUR][1000 genomes]
rs9884380	0.96[EUR][1000 genomes]
rs9991175	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9991635	0.96[EUR][1000 genomes]
rs9991953	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9992191	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9992404	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9994215	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9994807	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9994923	0.95[EUR][1000 genomes]
rs9996094	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9997026	0.96[EUR][1000 genomes]
rs9997198	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9997204	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9997373	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9997538	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9997542	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9997673	0.86[EUR][1000 genomes]
rs9997722	0.96[EUR][1000 genomes]
rs9997735	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006017	chr4:78139780-78312974	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1002683	chr4:78170317-78281331	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1010450	chr4:78182037-78317840	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1004824	chr4:78188691-78312974	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv1000447	chr4:78191608-78291173	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv3468255	chr4:78237484-78277631	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	esv5935	chr4:78237568-78277734	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	esv3468256	chr4:78237627-78277552	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	esv1845782	chr4:78237955-78321598	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv829974	chr4:78240718-78415642	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78264600-78266600	Enhancers	HMEC	breast
2	chr4:78265000-78266600	Enhancers	NHEK	skin
3	chr4:78265400-78270200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:78266200-78270000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr4:78266400-78269400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

The 2.0 version of rSNPBase

Variant report

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