The 2.0 version of rSNPBase

Variant report

Variant rs1543313
Chromosome Location chr1:166843859-166843860
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:166809600-166844400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:166825000-166844400 Weak transcription HSMMtube muscle
3 chr1:166829200-166844200 Weak transcription Fetal Heart heart
4 chr1:166829200-166844400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:166831600-166844600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:166831800-166844400 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:166831800-166844400 Weak transcription Fetal Kidney kidney
8 chr1:166834200-166844800 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:166836800-166844400 Weak transcription NH-A brain
10 chr1:166837800-166844200 Weak transcription NHDF-Ad bronchial
11 chr1:166838000-166844200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:166838200-166844000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:166838200-166844200 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr1:166838200-166844200 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr1:166838200-166844200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:166838200-166844400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:166838200-166844400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:166838200-166844400 Weak transcription HSMM muscle
19 chr1:166838200-166844400 Weak transcription Osteobl bone
20 chr1:166838200-166844600 Weak transcription Aorta Aorta
21 chr1:166838200-166844600 Weak transcription Gastric stomach
22 chr1:166838400-166844000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr1:166838400-166844000 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:166838400-166844200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:166838400-166844200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:166838400-166844200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr1:166838400-166844200 Weak transcription Adipose Nuclei Adipose
28 chr1:166838400-166844200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:166838400-166844200 Weak transcription Rectal Smooth Muscle rectum
30 chr1:166838400-166844200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:166838400-166844400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:166838400-166844400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:166838400-166844600 Weak transcription Fetal Muscle Trunk muscle
34 chr1:166838600-166844000 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:166838600-166844400 Weak transcription Fetal Lung lung
36 chr1:166838800-166844000 Weak transcription Primary hematopoietic stem cells blood
37 chr1:166838800-166844200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:166838800-166844200 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr1:166838800-166844200 Enhancers Brain Hippocampus Middle brain
40 chr1:166838800-166844200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:166838800-166844200 Weak transcription NHEK skin
42 chr1:166838800-166844400 Weak transcription Thymus Thymus
43 chr1:166839800-166844400 Weak transcription Primary B cells from peripheral blood blood
44 chr1:166840200-166844000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:166840200-166844400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:166840600-166844000 Weak transcription Fetal Brain Female brain
47 chr1:166840600-166844000 Genic enhancers Dnd41 blood
48 chr1:166840600-166844200 Enhancers Brain Cingulate Gyrus brain
49 chr1:166841400-166844400 Enhancers Primary T killer memory cells from peripheral blood blood
50 chr1:166841600-166844200 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015