Variant report

Variant	rs154473
Chromosome Location	chr5:57731598-57731599
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs149132	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs151892	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs154490	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs154494	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs158150	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs158152	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs158153	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs158160	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs158282	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs173450	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs32616	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57728400-57732400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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