Variant report

Variant	rs158282
Chromosome Location	chr5:57725558-57725559
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs149132	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs151892	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs154473	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs154490	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs154494	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs158150	0.87[ASW][hapmap];1.00[CEU][hapmap];0.89[GIH][hapmap];0.85[MKK][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs158152	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs158153	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs158160	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs173450	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs32616	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs158282	FLJ33641	cis	multi-tissue	Pritchard

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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