Variant report

Variant rs1550477
Chromosome Location chr16:30773822-30773823
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30771600-30776600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
2 chr16:30771800-30774600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr16:30771800-30774600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr16:30772200-30774200 Active TSS ES-I3 Cell Line embryonic stem cell
5 chr16:30772200-30774200 Active TSS Fetal Kidney kidney
6 chr16:30772200-30774600 Active TSS HUES48 Cell Line embryonic stem cell
7 chr16:30772200-30774600 Active TSS iPS-18 Cell Line embryonic stem cell
8 chr16:30772200-30774800 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr16:30772400-30774000 Active TSS Brain Anterior Caudate brain
10 chr16:30772400-30774000 Active TSS Rectal Smooth Muscle rectum
11 chr16:30772400-30774200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr16:30772400-30774200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr16:30772400-30774200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr16:30772400-30774200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr16:30772400-30774200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr16:30772400-30774200 Active TSS Colon Smooth Muscle Colon
17 chr16:30772400-30774200 Active TSS Pancreatic Islets Pancreatic Islet
18 chr16:30772400-30774200 Active TSS Psoas Muscle Psoas
19 chr16:30772400-30774200 Active TSS K562 blood
20 chr16:30772400-30774400 Active TSS HUES64 Cell Line embryonic stem cell
21 chr16:30772400-30774600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr16:30772400-30774600 Active TSS H9 Cell Line embryonic stem cell
23 chr16:30772400-30774600 Active TSS iPS-20b Cell Line embryonic stem cell
24 chr16:30772600-30774000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr16:30772600-30774000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr16:30772600-30774000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr16:30772600-30774000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
28 chr16:30772600-30774000 Active TSS Primary T killer memory cells from peripheral blood blood
29 chr16:30772600-30774000 Active TSS Cortex derived primary cultured neurospheres brain
30 chr16:30772600-30774000 Active TSS Brain Cingulate Gyrus brain
31 chr16:30772600-30774000 Active TSS Duodenum Smooth Muscle Duodenum
32 chr16:30772600-30774000 Active TSS Thymus Thymus
33 chr16:30772600-30774000 Active TSS HUVEC blood vessel
34 chr16:30772600-30774200 Active TSS ES-WA7 Cell Line embryonic stem cell
35 chr16:30772600-30774200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr16:30772600-30774200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr16:30772600-30774200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr16:30772600-30774200 Active TSS Breast Myoepithelial Primary Cells Breast
39 chr16:30772600-30774200 Active TSS Muscle Satellite Cultured Cells --
40 chr16:30772600-30774200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
41 chr16:30772600-30774200 Active TSS Fetal Intestine Large intestine
42 chr16:30772600-30774200 Active TSS Sigmoid Colon Sigmoid Colon
43 chr16:30772600-30774200 Active TSS GM12878-XiMat blood
44 chr16:30772600-30774200 Active TSS NH-A brain
45 chr16:30772600-30774400 Active TSS Aorta Aorta
46 chr16:30772600-30774400 Active TSS A549 lung
47 chr16:30772600-30774400 Active TSS NHDF-Ad bronchial
48 chr16:30772800-30774000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
49 chr16:30772800-30774000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
50 chr16:30772800-30774000 Active TSS Primary T helper naive cells from peripheral blood blood

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