Variant report
Variant | rs155902 |
---|---|
Chromosome Location | chr1:189577261-189577262 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1033838 | 0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1033839 | 0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1033840 | 0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs1033841 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs1033842 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10489760 | 0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10733059 | 0.80[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10754243 | 0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10800627 | 0.84[EUR][1000 genomes] |
rs10919556 | 0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10919607 | 0.80[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10922360 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10922362 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10922364 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10922365 | 0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10922443 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12079862 | 0.82[EUR][1000 genomes] |
rs12118969 | 0.94[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12127003 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12745556 | 0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1339445 | 0.91[CEU][hapmap] |
rs1339446 | 0.83[EUR][1000 genomes] |
rs1393499 | 0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1393500 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs155901 | 0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs155904 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs155916 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1566679 | 0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs1976437 | 0.88[CEU][hapmap];0.81[CHB][hapmap];0.84[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1976438 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2027325 | 0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2038651 | 0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2772317 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2772318 | 0.92[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs2902583 | 0.80[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs471394 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs472341 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs472988 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs473773 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs475821 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs475908 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs476454 | 0.96[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs476884 | 0.84[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs477023 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs477876 | 0.91[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs478424 | 0.92[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs478740 | 0.92[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs478799 | 0.90[CEU][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs480025 | 0.81[CEU][hapmap];0.82[CHB][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap] |
rs480055 | 0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs480148 | 0.96[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs481737 | 0.92[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs482865 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs486286 | 0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs487498 | 0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs488657 | 0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs494220 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs494497 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs501912 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs502019 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs502044 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs504384 | 0.85[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs507655 | 0.92[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs509442 | 0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs513328 | 0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs513551 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs515441 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs515528 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs516851 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs521299 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs521702 | 0.83[EUR][1000 genomes] |
rs523337 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs524177 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs534795 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs534896 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs537703 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs539147 | 0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs540093 | 0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs541175 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs544343 | 0.86[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs545162 | 0.87[EUR][1000 genomes] |
rs548796 | 0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs551577 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs554431 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs554852 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs557000 | 0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs560227 | 0.92[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs560685 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs562347 | 0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs563323 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs563883 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs563908 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs564100 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs564871 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs565944 | 0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs570816 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs571518 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs571656 | 0.83[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs571743 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs572342 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs573458 | 0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs574992 | 0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs575402 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs575460 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs576034 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs576377 | 0.84[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs577137 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs577515 | 0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs579032 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs579567 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs581398 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs61819063 | 0.86[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs693683 | 0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs695185 | 0.85[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7521955 | 0.83[CEU][hapmap];0.95[TSI][hapmap] |
rs7524197 | 0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7532675 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7538568 | 0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9287137 | 0.82[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv548483 | chr1:188802542-189672228 | Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv1009962 | chr1:188849003-189605507 | Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
3 | nsv535232 | chr1:188849003-189605507 | Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
4 | nsv999435 | chr1:188997868-189849121 | Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
5 | nsv1012877 | chr1:189035500-189804333 | Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
6 | nsv872658 | chr1:189069537-189675416 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
7 | nsv534452 | chr1:189129332-189924389 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
8 | nsv872662 | chr1:189211622-189741561 | Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
9 | nsv872672 | chr1:189238665-189585380 | Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
10 | nsv872673 | chr1:189238665-189731048 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
11 | esv2757763 | chr1:189246533-189649328 | Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Weak transcription Bivalent Enhancer Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
12 | esv2758982 | chr1:189246533-189649328 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
13 | nsv872683 | chr1:189286816-189748851 | Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
14 | nsv1014923 | chr1:189305229-189614654 | Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
15 | nsv872696 | chr1:189321018-189620278 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
16 | nsv523001 | chr1:189350700-189600151 | Enhancers ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
17 | nsv427863 | chr1:189356268-189709137 | Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
18 | nsv548516 | chr1:189418504-189589339 | Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
19 | nsv548517 | chr1:189427759-189589339 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
20 | nsv548518 | chr1:189428501-189589339 | Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
21 | nsv999995 | chr1:189429394-189582013 | Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Genic enhancers Flanking Bivalent TSS/Enh | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
22 | nsv1008127 | chr1:189429394-189588831 | Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
23 | nsv1012568 | chr1:189429394-189594302 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
24 | nsv1003741 | chr1:189447275-189702125 | Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
25 | nsv535241 | chr1:189447275-189702125 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
26 | nsv1010463 | chr1:189488465-189612966 | Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh | Chromatin interactive region | n/a | inside rSNPs | diseases |
27 | nsv1005794 | chr1:189488465-190063923 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
28 | nsv872709 | chr1:189512884-189600151 | Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh | Chromatin interactive region | n/a | inside rSNPs | diseases |
29 | nsv872710 | chr1:189512884-189695297 | Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
30 | nsv1004742 | chr1:189526599-189652035 | Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
31 | nsv872711 | chr1:189528943-189620278 | Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
32 | nsv872712 | chr1:189528943-189731048 | Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
33 | nsv872713 | chr1:189543576-189620278 | Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh | Chromatin interactive region | n/a | inside rSNPs | diseases |
34 | nsv872714 | chr1:189543576-189636292 | Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
35 | nsv872715 | chr1:189543576-189731048 | Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
36 | nsv466628 | chr1:189548411-189600151 | Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Genic enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
37 | nsv548522 | chr1:189548411-189600151 | Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
38 | nsv1009290 | chr1:189554045-189908459 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
39 | nsv497885 | chr1:189562225-190086077 | Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
40 | nsv872716 | chr1:189568547-189736833 | Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:189575800-189578800 | Enhancers | Muscle Satellite Cultured Cells | -- |
2 | chr1:189576800-189577400 | Flanking Active TSS | A549 | lung |