Variant report

Variant	rs159029
Chromosome Location	chr5:94215894-94215895
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs159030	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs159032	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs159352	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs293054	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs293056	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs293058	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs40590	0.81[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr5:94191000-94232200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr5:94200800-94236600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:94204400-94240600	Weak transcription	Lung	lung
5	chr5:94206800-94230000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:94207000-94227000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:94207200-94223600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr5:94207200-94230000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr5:94207200-94240400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr5:94208800-94220000	Weak transcription	Brain Anterior Caudate	brain
11	chr5:94209400-94223000	Weak transcription	HUVEC	blood vessel
12	chr5:94211400-94224200	Weak transcription	Primary T cells from cord blood	blood
13	chr5:94213800-94216000	Weak transcription	Primary neutrophils fromperipheralblood	blood
14	chr5:94215600-94216600	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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