Variant report

Variant	rs1613279
Chromosome Location	chr10:44460411-44460412
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44459351..44461171-chr10:44463524..44465166,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11238711	1.00[ASN][1000 genomes]
rs1147905	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598807	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12266297	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1254672	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1254675	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1254847	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1254849	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1262195	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1613984	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17463850	1.00[ASN][1000 genomes]
rs1749800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2005094	1.00[ASN][1000 genomes]
rs2764793	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2764794	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2764795	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2764796	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2798996	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61856550	1.00[ASN][1000 genomes]
rs61859388	1.00[ASN][1000 genomes]
rs61859402	1.00[ASN][1000 genomes]
rs61861567	1.00[ASN][1000 genomes]
rs61861585	1.00[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44437600-44460800	Weak transcription	Gastric	stomach
2	chr10:44455000-44460800	Weak transcription	Aorta	Aorta
3	chr10:44455600-44462000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr10:44455800-44460800	Weak transcription	Fetal Heart	heart
5	chr10:44456600-44461600	Enhancers	Fetal Kidney	kidney
6	chr10:44457200-44461200	Enhancers	Fetal Stomach	stomach
7	chr10:44458200-44461400	Weak transcription	Lung	lung
8	chr10:44459200-44460600	Weak transcription	Stomach Smooth Muscle	stomach
9	chr10:44459200-44462000	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr10:44459200-44462000	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr10:44459600-44461800	Enhancers	Fetal Muscle Leg	muscle
12	chr10:44459600-44461800	Enhancers	GM12878-XiMat	blood
13	chr10:44459600-44462000	Enhancers	Primary hematopoietic stem cells	blood
14	chr10:44459600-44462000	Enhancers	Adipose Nuclei	Adipose
15	chr10:44459800-44461400	Weak transcription	Right Atrium	heart
16	chr10:44460000-44460600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr10:44460000-44460600	Enhancers	Osteobl	bone
18	chr10:44460000-44461200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
19	chr10:44460200-44460600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr10:44460200-44461200	Weak transcription	Ovary	ovary
21	chr10:44460200-44461400	Weak transcription	Left Ventricle	heart
22	chr10:44460200-44461600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr10:44460200-44466000	Weak transcription	Right Ventricle	heart
24	chr10:44460200-44466800	Weak transcription	Spleen	Spleen
25	chr10:44460400-44460600	Enhancers	Primary hematopoietic stem cells short term culture	blood
26	chr10:44460400-44460800	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
27	chr10:44460400-44460800	Flanking Active TSS	HUVEC	blood vessel
28	chr10:44460400-44461000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr10:44460400-44461400	Enhancers	NH-A	brain
30	chr10:44460400-44461600	Enhancers	Muscle Satellite Cultured Cells	--
31	chr10:44460400-44461800	Enhancers	NHDF-Ad	bronchial

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