Variant report

Variant rs162388
Chromosome Location chr21:44936032-44936033
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44919800-44936800 Weak transcription Fetal Brain Female brain
2 chr21:44923400-44936600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr21:44923400-44936600 Weak transcription Brain Germinal Matrix brain
4 chr21:44926800-44938200 Enhancers Fetal Thymus thymus
5 chr21:44928800-44941000 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr21:44929200-44937800 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr21:44929200-44938200 Enhancers HSMM muscle
8 chr21:44929200-44943400 Enhancers Placenta Amnion Placenta Amnion
9 chr21:44929600-44943400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr21:44929800-44938600 Enhancers Esophagus oesophagus
11 chr21:44929800-44938800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr21:44929800-44943600 Enhancers HMEC breast
13 chr21:44930200-44938400 Enhancers Pancreas Pancrea
14 chr21:44930200-44939000 Enhancers Fetal Intestine Small intestine
15 chr21:44930600-44939800 Enhancers Fetal Intestine Large intestine
16 chr21:44930800-44937800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr21:44931400-44936400 Weak transcription Fetal Kidney kidney
18 chr21:44932000-44937200 Weak transcription Colon Smooth Muscle Colon
19 chr21:44932200-44936200 Weak transcription Fetal Heart heart
20 chr21:44932400-44936400 Enhancers Stomach Mucosa stomach
21 chr21:44932600-44937800 Enhancers Liver Liver
22 chr21:44932800-44936400 Enhancers Rectal Mucosa Donor 31 rectum
23 chr21:44933400-44938200 Enhancers Muscle Satellite Cultured Cells --
24 chr21:44934000-44936400 Enhancers Skeletal Muscle Male skeletal muscle
25 chr21:44934000-44938400 Enhancers Adipose Nuclei Adipose
26 chr21:44934000-44938400 Enhancers Left Ventricle heart
27 chr21:44934000-44938400 Enhancers Lung lung
28 chr21:44934200-44936200 Enhancers NHEK skin
29 chr21:44934200-44936800 Bivalent Enhancer Fetal Muscle Trunk muscle
30 chr21:44934200-44937800 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr21:44934200-44937800 Enhancers Duodenum Smooth Muscle Duodenum
32 chr21:44934200-44938000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr21:44934200-44938000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr21:44934200-44938000 Enhancers Duodenum Mucosa Duodenum
35 chr21:44934400-44937600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr21:44934400-44938200 Enhancers NH-A brain
37 chr21:44934400-44938400 Enhancers Sigmoid Colon Sigmoid Colon
38 chr21:44934400-44941200 Enhancers HUVEC blood vessel
39 chr21:44934600-44937200 Enhancers Primary monocytes fromperipheralblood blood
40 chr21:44934600-44937200 Enhancers Thymus Thymus
41 chr21:44934600-44937800 Enhancers Primary hematopoietic stem cells blood
42 chr21:44934600-44938000 Enhancers Small Intestine intestine
43 chr21:44934600-44938200 Enhancers Right Atrium heart
44 chr21:44934600-44938400 Enhancers Skeletal Muscle Female skeletal muscle
45 chr21:44934600-44940200 Enhancers Placenta Placenta
46 chr21:44934800-44937000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr21:44934800-44937200 Enhancers Monocytes-CD14+_RO01746 blood
48 chr21:44934800-44937600 Weak transcription Gastric stomach
49 chr21:44935000-44936200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr21:44935200-44936200 Enhancers Hela-S3 cervix

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