Variant report

Variant rs162390
Chromosome Location chr21:44936826-44936827
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44926800-44938200 Enhancers Fetal Thymus thymus
2 chr21:44928800-44941000 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr21:44929200-44937800 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr21:44929200-44938200 Enhancers HSMM muscle
5 chr21:44929200-44943400 Enhancers Placenta Amnion Placenta Amnion
6 chr21:44929600-44943400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr21:44929800-44938600 Enhancers Esophagus oesophagus
8 chr21:44929800-44938800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr21:44929800-44943600 Enhancers HMEC breast
10 chr21:44930200-44938400 Enhancers Pancreas Pancrea
11 chr21:44930200-44939000 Enhancers Fetal Intestine Small intestine
12 chr21:44930600-44939800 Enhancers Fetal Intestine Large intestine
13 chr21:44930800-44937800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr21:44932000-44937200 Weak transcription Colon Smooth Muscle Colon
15 chr21:44932600-44937800 Enhancers Liver Liver
16 chr21:44933400-44938200 Enhancers Muscle Satellite Cultured Cells --
17 chr21:44934000-44938400 Enhancers Adipose Nuclei Adipose
18 chr21:44934000-44938400 Enhancers Left Ventricle heart
19 chr21:44934000-44938400 Enhancers Lung lung
20 chr21:44934200-44937800 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr21:44934200-44937800 Enhancers Duodenum Smooth Muscle Duodenum
22 chr21:44934200-44938000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr21:44934200-44938000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr21:44934200-44938000 Enhancers Duodenum Mucosa Duodenum
25 chr21:44934400-44937600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr21:44934400-44938200 Enhancers NH-A brain
27 chr21:44934400-44938400 Enhancers Sigmoid Colon Sigmoid Colon
28 chr21:44934400-44941200 Enhancers HUVEC blood vessel
29 chr21:44934600-44937200 Enhancers Primary monocytes fromperipheralblood blood
30 chr21:44934600-44937200 Enhancers Thymus Thymus
31 chr21:44934600-44937800 Enhancers Primary hematopoietic stem cells blood
32 chr21:44934600-44938000 Enhancers Small Intestine intestine
33 chr21:44934600-44938200 Enhancers Right Atrium heart
34 chr21:44934600-44938400 Enhancers Skeletal Muscle Female skeletal muscle
35 chr21:44934600-44940200 Enhancers Placenta Placenta
36 chr21:44934800-44937000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr21:44934800-44937200 Enhancers Monocytes-CD14+_RO01746 blood
38 chr21:44934800-44937600 Weak transcription Gastric stomach
39 chr21:44935400-44938000 Enhancers Fetal Stomach stomach
40 chr21:44935400-44938400 Enhancers Right Ventricle heart
41 chr21:44935400-44943400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr21:44935600-44937000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
43 chr21:44935800-44937400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr21:44935800-44937400 Flanking Active TSS HepG2 liver
45 chr21:44935800-44938000 Enhancers Fetal Muscle Leg muscle
46 chr21:44935800-44938200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr21:44935800-44938400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr21:44935800-44938400 Enhancers Fetal Lung lung
49 chr21:44936000-44937200 Enhancers Spleen Spleen
50 chr21:44936000-44937800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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