Variant report

Variant rs2838338
Chromosome Location chr21:45075582-45075583
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45060400-45078600 Weak transcription Pancreas Pancrea
2 chr21:45065800-45078600 Weak transcription Fetal Muscle Leg muscle
3 chr21:45066200-45077600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr21:45066600-45077400 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr21:45066600-45078200 Weak transcription Brain Cingulate Gyrus brain
6 chr21:45066600-45078800 Weak transcription Brain Hippocampus Middle brain
7 chr21:45066600-45078800 Weak transcription Right Atrium heart
8 chr21:45066600-45079000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr21:45066600-45079000 Weak transcription Brain Substantia Nigra brain
10 chr21:45066800-45078800 Weak transcription Fetal Intestine Small intestine
11 chr21:45067000-45077800 Weak transcription Dnd41 blood
12 chr21:45067000-45078600 Weak transcription HepG2 liver
13 chr21:45068400-45077600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr21:45072800-45076400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr21:45072800-45076800 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr21:45072800-45077400 Weak transcription Primary hematopoietic stem cells blood
17 chr21:45073000-45076800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr21:45073600-45077600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr21:45074000-45078800 Weak transcription K562 blood
20 chr21:45074400-45075600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr21:45074400-45075600 Enhancers Liver Liver
22 chr21:45074400-45075600 Enhancers Hela-S3 cervix
23 chr21:45074400-45075800 Enhancers HUVEC blood vessel
24 chr21:45074600-45075600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr21:45074600-45075600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr21:45074600-45075600 Enhancers Muscle Satellite Cultured Cells --
27 chr21:45074600-45075600 Enhancers NHLF lung
28 chr21:45074600-45075800 Enhancers NH-A brain
29 chr21:45074600-45075800 Enhancers NHDF-Ad bronchial
30 chr21:45074600-45076400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr21:45074800-45075800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr21:45074800-45076000 Enhancers HMEC breast
33 chr21:45074800-45076000 Enhancers NHEK skin
34 chr21:45074800-45077800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr21:45074800-45079400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr21:45075000-45075800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr21:45075200-45075600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr21:45075200-45076000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr21:45075200-45079000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr21:45075200-45079000 Weak transcription A549 lung
41 chr21:45075400-45077200 Weak transcription Adipose Nuclei Adipose
42 chr21:45075400-45078800 Weak transcription Osteobl bone

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