The 2.0 version of rSNPBase

Variant report

Variant rs1662942
Chromosome Location chr2:30674259-30674260
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671000-30675600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:30671000-30675600 Weak transcription Psoas Muscle Psoas
3 chr2:30671000-30677400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:30671000-30678200 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:30671000-30678400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:30671000-30679000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:30671000-30682000 Weak transcription Aorta Aorta
8 chr2:30671000-30685200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:30671200-30678400 Weak transcription H1 Cell Line embryonic stem cell
10 chr2:30671200-30681200 Weak transcription Right Atrium heart
11 chr2:30671200-30688200 Weak transcription HSMM muscle
12 chr2:30671600-30674400 Weak transcription NHEK skin
13 chr2:30671600-30675600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr2:30671600-30675600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:30671600-30676400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:30671600-30676800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:30671600-30678400 Weak transcription Colon Smooth Muscle Colon
18 chr2:30671600-30678800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr2:30671600-30679000 Weak transcription Lung lung
20 chr2:30671600-30682000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:30671600-30682000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:30671600-30683800 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr2:30671600-30685600 Weak transcription Primary hematopoietic stem cells blood
24 chr2:30671600-30688000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:30671600-30688200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:30671600-30694600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr2:30671600-30703400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:30671800-30675400 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr2:30671800-30675600 Weak transcription Fetal Brain Female brain
31 chr2:30671800-30677400 Weak transcription Small Intestine intestine
32 chr2:30671800-30679600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr2:30671800-30679600 Weak transcription Fetal Kidney kidney
34 chr2:30671800-30681400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr2:30672000-30674400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr2:30672000-30675600 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr2:30672000-30675600 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:30672000-30675600 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr2:30672000-30675600 Weak transcription NHDF-Ad bronchial
40 chr2:30672000-30677400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:30672000-30678200 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr2:30672000-30678200 Weak transcription Right Ventricle heart
43 chr2:30672000-30679000 Weak transcription Ovary ovary
44 chr2:30672000-30679200 Weak transcription Thymus Thymus
45 chr2:30672000-30680600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr2:30672000-30681000 Weak transcription Primary B cells from peripheral blood blood
47 chr2:30672000-30681200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr2:30672000-30681800 Weak transcription Primary B cells from cord blood blood
49 chr2:30672000-30682000 Weak transcription Stomach Smooth Muscle stomach
50 chr2:30672000-30684600 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015