The 2.0 version of rSNPBase

Variant report

Variant rs829686
Chromosome Location chr2:30705820-30705821
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30678600-30710600 Weak transcription NHLF lung
2 chr2:30688600-30710000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:30695200-30707000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:30695800-30706600 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:30696200-30710600 Weak transcription Ovary ovary
6 chr2:30697400-30710400 Weak transcription Fetal Kidney kidney
7 chr2:30697800-30720800 Weak transcription Thymus Thymus
8 chr2:30698000-30708000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr2:30698000-30709400 Weak transcription Pancreas Pancrea
10 chr2:30698200-30710600 Weak transcription Primary T cells fromperipheralblood blood
11 chr2:30698400-30706800 Weak transcription Primary B cells from peripheral blood blood
12 chr2:30699000-30709600 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr2:30699000-30711800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:30699600-30709400 Weak transcription Right Ventricle heart
15 chr2:30701200-30714400 Weak transcription HSMM muscle
16 chr2:30702800-30710400 Weak transcription Primary T cells from cord blood blood
17 chr2:30703600-30706000 Enhancers Fetal Heart heart
18 chr2:30703600-30706000 Enhancers Small Intestine intestine
19 chr2:30704200-30706000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:30704200-30706000 Enhancers Monocytes-CD14+_RO01746 blood
21 chr2:30704400-30706200 Enhancers Primary neutrophils fromperipheralblood blood
22 chr2:30704600-30706600 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr2:30704600-30707000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:30704600-30709400 Weak transcription Left Ventricle heart
25 chr2:30704600-30710600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:30704600-30710600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr2:30704600-30715800 Weak transcription Psoas Muscle Psoas
28 chr2:30704600-30719600 Weak transcription Right Atrium heart
29 chr2:30704600-30719800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr2:30704600-30720600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:30704800-30707000 Weak transcription Primary B cells from cord blood blood
32 chr2:30704800-30707000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr2:30704800-30707000 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:30704800-30708600 Weak transcription K562 blood
35 chr2:30704800-30710400 Weak transcription Colon Smooth Muscle Colon
36 chr2:30704800-30710800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr2:30704800-30714200 Weak transcription HSMMtube muscle
38 chr2:30704800-30714400 Weak transcription A549 lung
39 chr2:30705000-30706600 Weak transcription GM12878-XiMat blood
40 chr2:30705000-30709400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:30705200-30710400 Weak transcription Duodenum Mucosa Duodenum
42 chr2:30705400-30710400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:30705600-30708000 Weak transcription Fetal Stomach stomach
44 chr2:30705600-30710200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:30705600-30710600 Weak transcription Fetal Lung lung
46 chr2:30705600-30711000 Weak transcription Fetal Intestine Large intestine
47 chr2:30705600-30711400 Weak transcription Stomach Smooth Muscle stomach
48 chr2:30705800-30706000 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr2:30705800-30709400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015