The 2.0 version of rSNPBase

Variant report

Variant rs829570
Chromosome Location chr2:30684289-30684290
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671000-30685200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:30671200-30688200 Weak transcription HSMM muscle
3 chr2:30671600-30685600 Weak transcription Primary hematopoietic stem cells blood
4 chr2:30671600-30688000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr2:30671600-30688200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:30671600-30694600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:30671600-30703400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:30672000-30684600 Weak transcription Hela-S3 cervix
10 chr2:30672000-30686400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr2:30672000-30686800 Weak transcription Dnd41 blood
12 chr2:30672000-30688000 Weak transcription Fetal Lung lung
13 chr2:30674200-30687400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:30678400-30704200 Weak transcription Fetal Stomach stomach
15 chr2:30678600-30688000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:30678600-30703800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:30678600-30710600 Weak transcription NHLF lung
18 chr2:30678800-30687800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr2:30679200-30688000 Weak transcription Pancreas Pancrea
20 chr2:30679400-30688000 Weak transcription Duodenum Mucosa Duodenum
21 chr2:30679600-30685800 Weak transcription Fetal Thymus thymus
22 chr2:30679800-30687400 Weak transcription Fetal Kidney kidney
23 chr2:30679800-30688000 Weak transcription H1 Cell Line embryonic stem cell
24 chr2:30680400-30686400 Weak transcription Fetal Intestine Small intestine
25 chr2:30680400-30688000 Weak transcription Thymus Thymus
26 chr2:30680600-30688000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr2:30680600-30688000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:30681000-30685800 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr2:30681400-30688000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr2:30682200-30685200 Weak transcription Primary B cells from cord blood blood
31 chr2:30682200-30686600 Weak transcription HepG2 liver
32 chr2:30682200-30688000 Weak transcription GM12878-XiMat blood
33 chr2:30682400-30687400 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr2:30682400-30687800 Weak transcription Primary T cells fromperipheralblood blood
35 chr2:30682400-30688000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr2:30682400-30688000 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr2:30682400-30688000 Weak transcription Fetal Intestine Large intestine
38 chr2:30682400-30688000 Weak transcription Right Atrium heart
39 chr2:30682400-30693400 Weak transcription H9 Cell Line embryonic stem cell
40 chr2:30682400-30704400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr2:30682600-30685000 Weak transcription Primary B cells from peripheral blood blood
42 chr2:30682600-30685200 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr2:30682600-30686200 Weak transcription Spleen Spleen
44 chr2:30682600-30687400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr2:30682600-30687400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:30682600-30687600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:30682600-30687800 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr2:30682600-30687800 Weak transcription Aorta Aorta
49 chr2:30682600-30688000 Weak transcription Gastric stomach
50 chr2:30682600-30688000 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015