The 2.0 version of rSNPBase

Variant report

Variant rs829579
Chromosome Location chr2:30678838-30678839
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671000-30679000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:30671000-30682000 Weak transcription Aorta Aorta
3 chr2:30671000-30685200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr2:30671200-30681200 Weak transcription Right Atrium heart
5 chr2:30671200-30688200 Weak transcription HSMM muscle
6 chr2:30671600-30679000 Weak transcription Lung lung
7 chr2:30671600-30682000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:30671600-30682000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr2:30671600-30683800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr2:30671600-30685600 Weak transcription Primary hematopoietic stem cells blood
11 chr2:30671600-30688000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr2:30671600-30688200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:30671600-30694600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:30671600-30703400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr2:30671800-30679600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr2:30671800-30679600 Weak transcription Fetal Kidney kidney
18 chr2:30671800-30681400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr2:30672000-30679000 Weak transcription Ovary ovary
20 chr2:30672000-30679200 Weak transcription Thymus Thymus
21 chr2:30672000-30680600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr2:30672000-30681000 Weak transcription Primary B cells from peripheral blood blood
23 chr2:30672000-30681200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr2:30672000-30681800 Weak transcription Primary B cells from cord blood blood
25 chr2:30672000-30682000 Weak transcription Stomach Smooth Muscle stomach
26 chr2:30672000-30684600 Weak transcription Hela-S3 cervix
27 chr2:30672000-30686400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:30672000-30686800 Weak transcription Dnd41 blood
29 chr2:30672000-30688000 Weak transcription Fetal Lung lung
30 chr2:30672800-30682600 Enhancers Primary T helper cells PMA-I stimulated --
31 chr2:30673400-30679200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:30673600-30681400 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr2:30673800-30681400 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:30674000-30679200 Weak transcription Fetal Thymus thymus
35 chr2:30674200-30687400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:30675800-30679000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr2:30675800-30681600 Weak transcription Primary T cells from cord blood blood
38 chr2:30675800-30682000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:30675800-30682200 Enhancers HepG2 liver
40 chr2:30676200-30679000 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:30676200-30681200 Weak transcription Psoas Muscle Psoas
42 chr2:30676800-30679000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr2:30677000-30679000 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr2:30677000-30679400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:30677400-30679400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:30677400-30679400 Enhancers Duodenum Mucosa Duodenum
47 chr2:30677400-30680400 Enhancers Fetal Intestine Small intestine
48 chr2:30677400-30681800 Enhancers Fetal Intestine Large intestine
49 chr2:30677800-30683800 Enhancers Fetal Heart heart
50 chr2:30678000-30679200 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015