Variant report

Variant	rs16844186
Chromosome Location	chr2:141295079-141295080
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10496845	0.82[EUR][1000 genomes]
rs13419625	0.82[EUR][1000 genomes]
rs1485846	0.96[EUR][1000 genomes]
rs16844161	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs16844168	1.00[EUR][1000 genomes]
rs16844171	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844174	1.00[EUR][1000 genomes]
rs16844175	0.82[EUR][1000 genomes]
rs16844177	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs16844178	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs16844181	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844189	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844198	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844202	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs16844206	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16844234	0.84[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs16844253	0.83[AMR][1000 genomes]
rs16856029	0.82[EUR][1000 genomes]
rs17591870	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141287600-141297200	Weak transcription	Brain Substantia Nigra	brain
2	chr2:141294200-141297000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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