Variant report

Variant	rs16844253
Chromosome Location	chr2:141313613-141313614
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16844161	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16844177	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16844178	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16844181	0.83[AMR][1000 genomes]
rs16844186	0.83[AMR][1000 genomes]
rs16844189	0.83[AMR][1000 genomes]
rs16844198	0.83[AMR][1000 genomes]
rs16844202	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16844206	0.83[AMR][1000 genomes]
rs16844234	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs16844252	1.00[EUR][1000 genomes]
rs17591870	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583192	chr2:141310721-141350100	Enhancers Weak transcription	Chromatin interactive region miRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141312600-141314000	Enhancers	Liver	Liver
2	chr2:141313600-141314000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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