The 2.0 version of rSNPBase

Variant report

Variant rs1684896
Chromosome Location chr10:61627328-61627329
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61571400-61628000 Weak transcription Spleen Spleen
2 chr10:61583200-61640600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr10:61593200-61629400 Weak transcription Lung lung
4 chr10:61608000-61637200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:61610400-61628000 Weak transcription Fetal Muscle Trunk muscle
6 chr10:61614200-61629400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr10:61615200-61628000 Weak transcription Esophagus oesophagus
8 chr10:61618000-61632600 Weak transcription Muscle Satellite Cultured Cells --
9 chr10:61618400-61628600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr10:61618600-61633200 Weak transcription HSMM muscle
11 chr10:61621200-61628400 Weak transcription Fetal Intestine Large intestine
12 chr10:61621200-61630200 Weak transcription Fetal Stomach stomach
13 chr10:61621800-61628400 Weak transcription Fetal Muscle Leg muscle
14 chr10:61623800-61628000 Enhancers Primary T helper cells PMA-I stimulated --
15 chr10:61624200-61627400 Enhancers Primary T helper cells fromperipheralblood blood
16 chr10:61624200-61630400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr10:61624400-61630400 Enhancers Pancreas Pancrea
18 chr10:61624400-61632000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr10:61624600-61631200 Weak transcription Fetal Lung lung
20 chr10:61624800-61628600 Weak transcription H9 Cell Line embryonic stem cell
21 chr10:61624800-61633000 Weak transcription Brain Germinal Matrix brain
22 chr10:61624800-61641000 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr10:61625000-61627400 Weak transcription Colonic Mucosa Colon
24 chr10:61625000-61627800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr10:61625000-61627800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr10:61625000-61628200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr10:61625000-61628200 Weak transcription Hela-S3 cervix
28 chr10:61625000-61628400 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr10:61625000-61628800 Weak transcription Right Ventricle heart
30 chr10:61625000-61628800 Weak transcription Stomach Smooth Muscle stomach
31 chr10:61625000-61629400 Weak transcription H1 Cell Line embryonic stem cell
32 chr10:61625000-61629400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr10:61625000-61629400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr10:61625000-61632000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr10:61625000-61632000 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr10:61625000-61632600 Weak transcription Ovary ovary
37 chr10:61625000-61638800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr10:61625000-61655400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr10:61625200-61628000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr10:61625200-61628400 Weak transcription Fetal Intestine Small intestine
41 chr10:61625200-61628400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr10:61625200-61629800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr10:61625200-61631600 Weak transcription Rectal Smooth Muscle rectum
44 chr10:61625200-61632000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr10:61625200-61639200 Weak transcription Primary hematopoietic stem cells blood
46 chr10:61625400-61631600 Weak transcription Primary B cells from cord blood blood
47 chr10:61625400-61631600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr10:61625600-61627800 Weak transcription Duodenum Mucosa Duodenum
49 chr10:61625600-61628200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr10:61625600-61629400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015