Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12331631	1.00[ASN][1000 genomes]
rs1500491	0.92[AFR][1000 genomes]
rs1500492	0.95[AFR][1000 genomes]
rs1500495	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28839490	1.00[ASN][1000 genomes]
rs41502944	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4389614	0.95[AFR][1000 genomes]
rs56316722	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57338164	1.00[AMR][1000 genomes]
rs57933080	1.00[AMR][1000 genomes]
rs58204296	1.00[ASN][1000 genomes]
rs59366613	1.00[AMR][1000 genomes]
rs61175363	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61308768	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61700072	1.00[AMR][1000 genomes]
rs73813021	1.00[AMR][1000 genomes]
rs73813035	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73813038	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73813039	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73813040	1.00[AMR][1000 genomes]
rs73813042	1.00[AMR][1000 genomes]
rs73813044	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73813049	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7656155	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv594104	chr4:45105210-45665828	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv878984	chr4:45191856-45321022	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:45319800-45322200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:45320400-45325600	Weak transcription	Fetal Heart	heart

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