Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10517184	1.00[CHB][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10517185	1.00[CHB][hapmap]
rs10938482	1.00[CHB][hapmap]
rs11733050	1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs12331254	1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs17461863	0.86[CHB][hapmap];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs17600442	1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs17600511	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs17653449	1.00[CHB][hapmap]
rs28502282	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28681526	0.94[ASN][1000 genomes]
rs34236483	0.92[ASN][1000 genomes]
rs4440195	0.84[ASN][1000 genomes]
rs4475120	0.89[ASN][1000 genomes]
rs4694846	1.00[CHB][hapmap]
rs4695220	1.00[CHB][hapmap]
rs4695223	0.92[ASN][1000 genomes]
rs58150060	0.94[ASN][1000 genomes]
rs58877228	0.92[ASN][1000 genomes]
rs6447550	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6830892	1.00[CHB][hapmap]
rs7677890	1.00[CHB][hapmap];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998919	chr4:47207023-47476876	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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