The 2.0 version of rSNPBase

Variant report

Variant rs16860616
Chromosome Location chr2:173366607-173366608
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173327800-173370800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:173329800-173371200 Weak transcription Hela-S3 cervix
3 chr2:173330600-173371400 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr2:173330600-173372200 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr2:173330600-173373200 Strong transcription NHEK skin
6 chr2:173330600-173373400 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr2:173330600-173373400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:173330600-173373600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:173330600-173374200 Weak transcription Stomach Mucosa stomach
10 chr2:173331000-173370000 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr2:173331000-173373200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:173331000-173373400 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr2:173331000-173373800 Strong transcription HMEC breast
14 chr2:173331200-173372000 Strong transcription iPS-18 Cell Line embryonic stem cell
15 chr2:173331400-173370200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:173346000-173370200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr2:173346000-173370200 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr2:173346000-173370600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:173346400-173371400 Weak transcription NHLF lung
20 chr2:173347000-173367200 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr2:173347400-173368600 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:173347800-173371600 Weak transcription Fetal Brain Male brain
23 chr2:173347800-173376200 Weak transcription Fetal Heart heart
24 chr2:173349400-173370400 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr2:173351200-173367800 Strong transcription HSMMtube muscle
26 chr2:173352000-173371400 Weak transcription Fetal Brain Female brain
27 chr2:173352000-173374200 Weak transcription Fetal Lung lung
28 chr2:173352400-173371400 Weak transcription Psoas Muscle Psoas
29 chr2:173353200-173368400 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr2:173354000-173370400 Weak transcription Brain Angular Gyrus brain
31 chr2:173354200-173369000 Weak transcription Rectal Smooth Muscle rectum
32 chr2:173356400-173379200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr2:173356600-173371400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr2:173356600-173375400 Weak transcription Brain Cingulate Gyrus brain
35 chr2:173356800-173369200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:173356800-173369200 Weak transcription Brain Anterior Caudate brain
37 chr2:173356800-173374600 Weak transcription Fetal Kidney kidney
38 chr2:173356800-173376000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:173356800-173376200 Weak transcription Brain Substantia Nigra brain
40 chr2:173357000-173368800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:173357000-173371000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:173357000-173371200 Weak transcription Ovary ovary
43 chr2:173357000-173373000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr2:173357000-173376000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr2:173357000-173376000 Weak transcription Aorta Aorta
46 chr2:173357200-173369200 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr2:173357200-173376600 Weak transcription Right Ventricle heart
48 chr2:173357600-173371400 Weak transcription NH-A brain
49 chr2:173357600-173376200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr2:173358000-173376200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015