Variant report

Variant	rs16872096
Chromosome Location	chr6:44538282-44538283
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44536539..44539243-chr6:44545765..44547570,2	K562	blood:
2	chr6:44518479..44520787-chr6:44537963..44540818,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AARS2-2	chr6:44537936-44538292	NONHSAT112964

rs_ID	r²[population]
rs16872169	1.00[AMR][1000 genomes]
rs61151000	1.00[AMR][1000 genomes]
rs6901424	1.00[AMR][1000 genomes]
rs6914604	1.00[AMR][1000 genomes]
rs73432248	1.00[AMR][1000 genomes]
rs73432251	1.00[AMR][1000 genomes]
rs73432252	1.00[AMR][1000 genomes]
rs73432254	1.00[AMR][1000 genomes]
rs73432255	1.00[AMR][1000 genomes]
rs73442495	1.00[AMR][1000 genomes]
rs7760256	1.00[AMR][1000 genomes]
rs9689182	1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44536600-44538600	Enhancers	Fetal Muscle Leg	muscle
2	chr6:44536800-44538600	Enhancers	Brain Substantia Nigra	brain
3	chr6:44536800-44538600	Enhancers	HSMMtube	muscle
4	chr6:44536800-44538800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:44536800-44538800	Enhancers	Left Ventricle	heart
6	chr6:44537000-44538400	Enhancers	Ovary	ovary
7	chr6:44537000-44538400	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr6:44537200-44538400	Enhancers	Colon Smooth Muscle	Colon
9	chr6:44537200-44538600	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr6:44537200-44538600	Enhancers	Psoas Muscle	Psoas
11	chr6:44537200-44538600	Enhancers	Right Atrium	heart
12	chr6:44537400-44538600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr6:44537400-44538600	Enhancers	Spleen	Spleen
14	chr6:44537600-44538400	Enhancers	Primary hematopoietic stem cells	blood
15	chr6:44537600-44538400	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr6:44537600-44538400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr6:44538000-44538400	Enhancers	Stomach Smooth Muscle	stomach
18	chr6:44538000-44538600	Enhancers	Duodenum Smooth Muscle	Duodenum
19	chr6:44538000-44538600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr6:44538000-44538600	Enhancers	Fetal Muscle Trunk	muscle
21	chr6:44538000-44538600	Enhancers	Monocytes-CD14+_RO01746	blood
22	chr6:44538000-44538800	Weak transcription	Brain Hippocampus Middle	brain
23	chr6:44538200-44538400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr6:44538200-44538600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr6:44538200-44538600	Enhancers	Lung	lung

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