Variant report

Variant	rs73432248
Chromosome Location	chr6:44429656-44429657
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44423031..44426172-chr6:44427931..44431207,4	K562	blood:
2	chr6:44300089..44302816-chr6:44427663..44430337,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16872096	1.00[AMR][1000 genomes]
rs16872169	1.00[AMR][1000 genomes]
rs61151000	1.00[AMR][1000 genomes]
rs6901424	1.00[AMR][1000 genomes]
rs73432251	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73432252	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73432254	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73432255	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7760256	1.00[AMR][1000 genomes]
rs9395019	0.89[AFR][1000 genomes]
rs9689182	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv603006	chr6:44428506-44449697	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv885860	chr6:44428506-44454333	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44396600-44432800	Weak transcription	Fetal Kidney	kidney
2	chr6:44416200-44432400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:44416400-44430800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr6:44420600-44430200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr6:44420800-44430600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:44420800-44432400	Weak transcription	Fetal Lung	lung
7	chr6:44422400-44431800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:44422400-44432000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr6:44424800-44430000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr6:44424800-44430200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr6:44424800-44431800	Weak transcription	Right Atrium	heart
12	chr6:44424800-44439400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr6:44425000-44437800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr6:44425600-44430800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr6:44425800-44430200	Weak transcription	Ovary	ovary
16	chr6:44426200-44429800	Weak transcription	K562	blood
17	chr6:44426400-44430200	Weak transcription	Spleen	Spleen
18	chr6:44426600-44430800	Weak transcription	HSMM	muscle
19	chr6:44429400-44433600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr6:44429600-44430200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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