Variant report

rSNPs within LD-proxies of this variant (count:13)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017085	chr8:34742896-35594241	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539546	chr8:34742896-35594241	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv520421	chr8:35155517-35479468	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35464200-35482400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr8:35466000-35480200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:35467400-35475800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:35469600-35482000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr8:35470000-35483000	Weak transcription	Fetal Intestine Small	intestine
6	chr8:35473400-35476000	Enhancers	Fetal Brain Male	brain
7	chr8:35473400-35476200	Enhancers	Fetal Heart	heart
8	chr8:35473600-35475800	Enhancers	Fetal Brain Female	brain
9	chr8:35473600-35476200	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr8:35474000-35475800	Enhancers	Liver	Liver
11	chr8:35474200-35476200	Enhancers	Brain Germinal Matrix	brain
12	chr8:35474400-35475800	Enhancers	Fetal Muscle Leg	muscle
13	chr8:35474600-35475600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr8:35474600-35475800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr8:35474600-35475800	Enhancers	Fetal Stomach	stomach
16	chr8:35474800-35475600	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr8:35474800-35475800	Enhancers	Brain Cingulate Gyrus	brain
18	chr8:35474800-35475800	Enhancers	Fetal Lung	lung
19	chr8:35475000-35475600	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr8:35475200-35476200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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