Variant report

(count:17 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr6:82328391-82328724	MCF-7	breast:	n/a	chr6:82328569-82328576
2	CTCF	chr6:82328544-82328620	Hela-S3	cervix:	n/a	n/a
3	CTCF	chr6:82328460-82328610	Hela-S3	cervix:	n/a	n/a
4	CTCF	chr6:82328440-82328590	HCPEpiC	choroid plexus:	n/a	n/a
5	CTCF	chr6:82328520-82328670	HEK293	kidney:	n/a	n/a
6	CTCF	chr6:82328420-82328570	HPAF	blood vessel:	n/a	n/a
7	CTCF	chr6:82328420-82328570	NHEK	skin:	n/a	n/a
8	CTCF	chr6:82328480-82328630	HMF	breast:	n/a	n/a
9	CTCF	chr6:82328420-82328570	HFF-Myc	foreskin:	n/a	n/a
10	CTCF	chr6:82328497-82328659	MCF-7	breast:	n/a	n/a
11	CTCF	chr6:82328500-82328650	HMF	breast:	n/a	n/a
12	CTCF	chr6:82328480-82328630	HepG2	liver:	n/a	n/a
13	CTCF	chr6:82328480-82328630	MCF-7	breast:	n/a	n/a
14	CTCF	chr6:82328500-82328650	NHEK	skin:	n/a	n/a
15	CTCF	chr6:82328540-82328690	AG04450	lung:	n/a	n/a
16	CTCF	chr6:82328420-82328570	HCT-116	colon:	n/a	n/a
17	CTCF	chr6:82328460-82328610	HCT-116	colon:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:82327148..82328693-chr6:82392956..82395035,2	MCF-7	breast:
2	chr6:82327003..82328794-chr6:82330643..82333134,2	MCF-7	breast:

No data

Variant related genes	Relation type
RNA5SP210	TF binding region
ENSG00000212336	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10498928	0.93[EUR][1000 genomes]
rs12660894	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12663931	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1321757	0.84[EUR][1000 genomes]
rs1407172	0.87[EUR][1000 genomes]
rs1575192	0.87[EUR][1000 genomes]
rs16893217	0.93[EUR][1000 genomes]
rs16893244	0.93[EUR][1000 genomes]
rs16893306	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16893333	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1830569	0.93[EUR][1000 genomes]
rs1983728	0.93[EUR][1000 genomes]
rs2298053	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4374864	0.93[EUR][1000 genomes]
rs59868018	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6454221	0.87[EUR][1000 genomes]
rs6454224	0.87[EUR][1000 genomes]
rs6904624	0.87[EUR][1000 genomes]
rs7766591	0.87[EUR][1000 genomes]
rs9361830	0.87[EUR][1000 genomes]
rs9449347	0.93[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82318000-82356600	Weak transcription	Aorta	Aorta
2	chr6:82328400-82328800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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