Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10498928	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12660894	0.87[EUR][1000 genomes]
rs1321757	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1407172	0.87[EUR][1000 genomes]
rs1575192	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16893217	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16893244	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16893279	0.85[JPT][hapmap];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16893306	0.87[EUR][1000 genomes]
rs16893333	0.87[EUR][1000 genomes]
rs1830569	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1983728	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2298053	0.87[EUR][1000 genomes]
rs4374864	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs558708	0.84[AMR][1000 genomes]
rs59868018	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6454221	0.87[EUR][1000 genomes]
rs6454224	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6904624	0.87[EUR][1000 genomes]
rs7766591	0.87[EUR][1000 genomes]
rs9361830	0.87[EUR][1000 genomes]
rs9449347	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82300400-82304400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:82300800-82302600	Weak transcription	Placenta	Placenta

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