The 2.0 version of rSNPBase

Variant report

Variant rs16900677
Chromosome Location chr8:90807080-90807081
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:90772200-90807200 Weak transcription Pancreas Pancrea
2 chr8:90772200-90809400 Weak transcription Small Intestine intestine
3 chr8:90773000-90812400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr8:90775800-90807200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr8:90783800-90829000 Weak transcription Aorta Aorta
6 chr8:90785600-90813800 Weak transcription Placenta Amnion Placenta Amnion
7 chr8:90785800-90807200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr8:90785800-90810800 Weak transcription Fetal Brain Female brain
9 chr8:90786000-90813000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr8:90786400-90809800 Weak transcription HepG2 liver
11 chr8:90795000-90808400 Weak transcription NHEK skin
12 chr8:90796200-90807200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr8:90797200-90808400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr8:90799400-90810200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr8:90799400-90814000 Weak transcription Gastric stomach
16 chr8:90799800-90811800 Weak transcription Fetal Kidney kidney
17 chr8:90800000-90808400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr8:90801000-90808000 Weak transcription Fetal Stomach stomach
19 chr8:90801000-90809600 Weak transcription Fetal Intestine Small intestine
20 chr8:90801200-90809800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr8:90802400-90808000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr8:90802600-90807600 Weak transcription Fetal Muscle Leg muscle
23 chr8:90802600-90808400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr8:90802600-90808400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr8:90802600-90808400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr8:90802600-90809200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr8:90802600-90809600 Weak transcription Brain Substantia Nigra brain
28 chr8:90802600-90810200 Weak transcription Fetal Intestine Large intestine
29 chr8:90802600-90814200 Weak transcription K562 blood
30 chr8:90802800-90807800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr8:90803000-90807400 Weak transcription Colon Smooth Muscle Colon
32 chr8:90803000-90807800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr8:90803000-90808400 Weak transcription HMEC breast
34 chr8:90803000-90808400 Weak transcription HUVEC blood vessel
35 chr8:90803000-90808400 Weak transcription NHLF lung
36 chr8:90803000-90811000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr8:90803000-90813400 Weak transcription Hela-S3 cervix
38 chr8:90803200-90808400 Weak transcription NH-A brain
39 chr8:90803200-90810400 Weak transcription Colonic Mucosa Colon
40 chr8:90803600-90810400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr8:90803600-90811200 Weak transcription Primary T cells from cord blood blood
42 chr8:90803600-90813800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr8:90804200-90808000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr8:90804200-90808400 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr8:90804400-90808000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr8:90804400-90809200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr8:90804400-90809600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr8:90804600-90808400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr8:90805200-90808000 Weak transcription Muscle Satellite Cultured Cells --
50 chr8:90805200-90808400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015