Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12247305	1.00[YRI][hapmap]
rs12249686	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12249754	1.00[EUR][1000 genomes]
rs12255999	0.86[YRI][hapmap]
rs12257401	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12261280	1.00[EUR][1000 genomes]
rs12264364	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12264374	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12264432	1.00[EUR][1000 genomes]
rs16914022	1.00[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs16914288	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs16914371	1.00[EUR][1000 genomes]
rs1909637	1.00[MEX][hapmap]
rs1909641	1.00[MEX][hapmap]
rs2090120	1.00[EUR][1000 genomes]
rs2393568	1.00[EUR][1000 genomes]
rs28406036	1.00[EUR][1000 genomes]
rs2893810	1.00[EUR][1000 genomes]
rs2893811	1.00[EUR][1000 genomes]
rs4275570	1.00[EUR][1000 genomes]
rs7073222	1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7077386	1.00[EUR][1000 genomes]
rs7096120	1.00[AMR][1000 genomes]
rs7475333	1.00[EUR][1000 genomes]
rs7898886	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7915582	1.00[EUR][1000 genomes]
rs7917618	1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975775	chr10:61477927-61486070	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61482200-61483400	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr10:61482600-61483400	Enhancers	Stomach Mucosa	stomach
3	chr10:61482600-61485600	Enhancers	Skeletal Muscle Female	skeletal muscle

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