Variant report

Variant	rs16915747
Chromosome Location	chr9:101175485-101175486
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:101173120..101175808-chr9:101177158..101179626,3	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10117265	1.00[ASN][1000 genomes]
rs10125047	1.00[ASN][1000 genomes]
rs12340587	1.00[ASN][1000 genomes]
rs16915689	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17690174	1.00[ASN][1000 genomes]
rs55683990	1.00[ASN][1000 genomes]
rs6478670	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430085	chr9:100928245-101339645	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv831664	chr9:101024862-101205637	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv831665	chr9:101170061-101367692	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101172400-101176800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr9:101172400-101177800	Weak transcription	Right Atrium	heart
3	chr9:101172800-101176400	Weak transcription	HUVEC	blood vessel
4	chr9:101173000-101176000	Weak transcription	Lung	lung
5	chr9:101173200-101175800	Weak transcription	Fetal Muscle Trunk	muscle
6	chr9:101173400-101177800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr9:101173600-101175800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:101174400-101175600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr9:101174400-101176000	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr9:101174600-101175600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr9:101174600-101176200	Enhancers	H1 Cell Line	embryonic stem cell
12	chr9:101174600-101176400	Enhancers	Fetal Kidney	kidney
13	chr9:101174800-101177800	Weak transcription	K562	blood
14	chr9:101175000-101175600	Enhancers	H9 Cell Line	embryonic stem cell
15	chr9:101175000-101175600	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr9:101175200-101175800	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr9:101175400-101175600	Flanking Active TSS	ES-WA7 Cell Line	embryonic stem cell
18	chr9:101175400-101175600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr9:101175400-101175600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr9:101175400-101176000	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr9:101175400-101176200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr9:101175400-101176200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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