Variant report

Variant	rs16925221
Chromosome Location	chr10:25287802-25287803
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11014310	1.00[AMR][1000 genomes]
rs1158057	1.00[AMR][1000 genomes]
rs12098488	1.00[AMR][1000 genomes]
rs16925204	1.00[AMR][1000 genomes]
rs16925206	1.00[AMR][1000 genomes]
rs16925213	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16925231	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34736361	1.00[AMR][1000 genomes]
rs3920009	1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7091416	0.87[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7901799	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25264600-25292200	Weak transcription	Ovary	ovary
2	chr10:25286800-25288200	Strong transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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