The 2.0 version of rSNPBase

Variant report

Variant rs16937608
Chromosome Location chr8:49429825-49429826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:49427600-49432000 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr8:49427600-49432200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr8:49427600-49433400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr8:49427800-49435000 Weak transcription Left Ventricle heart
5 chr8:49427800-49435000 Weak transcription Pancreas Pancrea
6 chr8:49427800-49438200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr8:49428000-49430000 Weak transcription H1 Cell Line embryonic stem cell
8 chr8:49428000-49430200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr8:49428000-49432000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr8:49428000-49432200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr8:49428000-49432200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr8:49428000-49433400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr8:49428000-49433400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr8:49428000-49433600 Weak transcription Esophagus oesophagus
15 chr8:49428000-49435200 Weak transcription Aorta Aorta
16 chr8:49428000-49435200 Weak transcription Placenta Placenta
17 chr8:49428000-49435600 Weak transcription Right Ventricle heart
18 chr8:49428000-49438400 Weak transcription Psoas Muscle Psoas
19 chr8:49428000-49448600 Weak transcription Right Atrium heart
20 chr8:49428200-49431000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr8:49428200-49433200 Weak transcription NHEK skin
22 chr8:49428200-49433400 Weak transcription HMEC breast
23 chr8:49428200-49433600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr8:49428200-49435600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr8:49428400-49431000 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr8:49428400-49434000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr8:49428400-49434200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr8:49428400-49438400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr8:49428600-49430800 Weak transcription HSMM muscle
30 chr8:49428600-49431000 Weak transcription Adipose Nuclei Adipose
31 chr8:49428600-49433600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr8:49428600-49434000 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr8:49428800-49430000 Weak transcription NHDF-Ad bronchial
34 chr8:49428800-49430200 Weak transcription Muscle Satellite Cultured Cells --
35 chr8:49428800-49431000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr8:49428800-49433600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr8:49428800-49433800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr8:49428800-49435000 Weak transcription NHLF lung
39 chr8:49428800-49435200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr8:49429000-49430800 Weak transcription Osteobl bone
41 chr8:49429000-49433000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr8:49429000-49434800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr8:49429000-49435200 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr8:49429200-49430400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr8:49429400-49430000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr8:49429400-49430400 Enhancers HUES64 Cell Line embryonic stem cell
47 chr8:49429400-49434800 Weak transcription Fetal Lung lung
48 chr8:49429600-49431400 Enhancers Primary B cells from peripheral blood blood
49 chr8:49429600-49431400 ZNF genes & repeats GM12878-XiMat blood
50 chr8:49429800-49430200 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015